Strain Fitness in Erwinia amylovora T8 around OLJFJH_17720

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1
3,725,132	+				+1.2
3,725,133	-				+0.1
3,725,233	+		OLJFJH_17710	0.12	+0.4
3,725,233	+		OLJFJH_17710	0.12	-1.6
3,725,234	-		OLJFJH_17710	0.13	-0.2
3,725,234	-		OLJFJH_17710	0.13	+1.7
3,725,249	+		OLJFJH_17710	0.14	-0.8
3,725,250	-		OLJFJH_17710	0.15	+1.3
3,725,270	+		OLJFJH_17710	0.17	+0.6
3,725,270	+		OLJFJH_17710	0.17	-0.6
3,725,271	-		OLJFJH_17710	0.17	+1.9
3,725,471	+		OLJFJH_17710	0.42	-1.4
3,725,472	-		OLJFJH_17710	0.42	+1.2
3,725,590	+		OLJFJH_17710	0.57	-1.5
3,725,722	+		OLJFJH_17710	0.73	+0.1
3,725,843	-		OLJFJH_17710	0.88	-0.5
3,725,843	-		OLJFJH_17710	0.88	-0.4
3,725,966	-				-0.8
3,725,970	-				-0.6
3,725,981	+				+0.1
3,725,990	-				-2.0
3,726,057	+				+0.7
3,726,058	-				-3.3
3,726,079	-				-2.4
3,726,109	+				-2.3
3,726,110	-				-1.9
3,726,110	-				-3.4
3,726,110	-				-4.2
3,726,171	+		OLJFJH_17720	0.12	-3.3
3,726,172	-		OLJFJH_17720	0.12	-1.6
3,726,172	-		OLJFJH_17720	0.12	-3.4
3,726,246	+		OLJFJH_17720	0.27	-2.9
3,726,246	+		OLJFJH_17720	0.27	-3.6
3,726,247	-		OLJFJH_17720	0.28	-3.9
3,726,248	+		OLJFJH_17720	0.28	-0.1
3,726,248	+		OLJFJH_17720	0.28	-5.1
3,726,492	+		OLJFJH_17720	0.78	-3.7
3,726,493	-		OLJFJH_17720	0.78	-3.3
3,726,493	-		OLJFJH_17720	0.78	-3.3
3,726,649	+				-0.6
3,726,649	+				+0.3
3,726,649	+				-0.7
3,726,649	+				+0.9
3,726,649	+				-0.1
3,726,650	-				-0.6
3,726,650	-				+0.9
3,726,650	-				-0.0
3,726,650	-				+1.4
3,726,656	+				+1.4
3,726,657	-				-0.7
3,726,658	+				-0.5
3,726,669	-				-0.2
3,726,669	-				-0.3
3,726,669	-				+0.5
3,726,669	-				-0.8
3,726,685	+				+0.1
3,726,741	+				-0.7
3,726,748	-				-0.7
3,726,837	+		OLJFJH_17725	0.20	+0.0
3,726,838	-		OLJFJH_17725	0.20	-0.8
3,726,838	-		OLJFJH_17725	0.20	+1.3
3,726,838	-		OLJFJH_17725	0.20	-0.6
3,726,872	-		OLJFJH_17725	0.24	+1.1
3,727,019	+		OLJFJH_17725	0.41	+0.4
3,727,019	+		OLJFJH_17725	0.41	+0.4
3,727,020	-		OLJFJH_17725	0.41	+0.1
3,727,054	+		OLJFJH_17725	0.45	-0.1
3,727,054	+		OLJFJH_17725	0.45	+0.3
3,727,054	+		OLJFJH_17725	0.45	-1.1
3,727,054	+		OLJFJH_17725	0.45	+0.7
3,727,055	-		OLJFJH_17725	0.45	+0.3
3,727,261	+		OLJFJH_17725	0.69	-1.2
3,727,261	+		OLJFJH_17725	0.69	-0.7
3,727,449	+				+0.1
3,727,537	+				+0.7
3,727,538	-				-0.2
3,727,568	-				+0.8
3,727,568	-				-0.4