Strain Fitness in Erwinia amylovora T8 around OLJFJH_16610

Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1
3,505,250	+		OLJFJH_16600	0.79	+0.6
3,505,515	+				+0.2
3,505,515	+				-1.0
3,505,516	-				-1.0
3,505,562	+				-0.9
3,505,562	+				+0.1
3,505,563	-				+3.8
3,505,563	-				-0.4
3,505,619	+				+0.5
3,505,651	+		OLJFJH_16605	0.12	-1.3
3,505,674	-		OLJFJH_16605	0.17	+0.6
3,505,722	-		OLJFJH_16605	0.26	-0.5
3,505,729	+		OLJFJH_16605	0.27	+1.8
3,505,851	+		OLJFJH_16605	0.50	+0.4
3,505,876	+		OLJFJH_16605	0.54	-0.8
3,505,881	-		OLJFJH_16605	0.55	-0.5
3,505,949	-		OLJFJH_16605	0.68	-0.2
3,505,949	-		OLJFJH_16605	0.68	+0.9
3,505,950	+		OLJFJH_16605	0.68	+0.3
3,505,950	+		OLJFJH_16605	0.68	+0.1
3,505,951	-		OLJFJH_16605	0.69	+0.1
3,505,962	-		OLJFJH_16605	0.71	-0.2
3,505,982	-		OLJFJH_16605	0.74	+3.1
3,505,982	-		OLJFJH_16605	0.74	-1.8
3,505,984	-		OLJFJH_16605	0.75	+1.4
3,506,008	+		OLJFJH_16605	0.79	-0.3
3,506,063	+		OLJFJH_16605	0.90	+1.8
3,506,063	+		OLJFJH_16605	0.90	-0.9
3,506,063	+		OLJFJH_16605	0.90	-0.1
3,506,129	+				-0.1
3,506,149	-				+0.3
3,506,158	+				-3.8
3,506,158	+				+1.7
3,506,178	-				+0.5
3,506,188	-				-0.2
3,506,215	+		OLJFJH_16610	0.21	-0.8
3,506,215	+		OLJFJH_16610	0.21	+0.6
3,506,215	+		OLJFJH_16610	0.21	-1.6
3,506,349	-				+1.3
3,506,547	-				+1.7
3,506,562	+				+0.2
3,506,616	+				-1.2
3,506,616	+				+2.0
3,506,621	-				-0.1
3,506,841	+		OLJFJH_16615	0.25	-1.0
3,506,841	+		OLJFJH_16615	0.25	+0.9
3,506,841	+		OLJFJH_16615	0.25	+0.6
3,506,842	-		OLJFJH_16615	0.25	-0.1
3,506,874	+		OLJFJH_16615	0.28	-0.0
3,506,875	-		OLJFJH_16615	0.28	-0.4
3,506,875	-		OLJFJH_16615	0.28	+1.1
3,506,899	-		OLJFJH_16615	0.30	+0.7
3,506,936	+		OLJFJH_16615	0.33	-2.0
3,507,020	+		OLJFJH_16615	0.41	+1.3
3,507,088	+		OLJFJH_16615	0.47	-0.2
3,507,201	+		OLJFJH_16615	0.56	+2.3
3,507,201	+		OLJFJH_16615	0.56	+0.4
3,507,201	+		OLJFJH_16615	0.56	-0.1
3,507,201	+		OLJFJH_16615	0.56	-1.2
3,507,202	-		OLJFJH_16615	0.57	-0.2
3,507,204	+		OLJFJH_16615	0.57	+0.8
3,507,204	+		OLJFJH_16615	0.57	+0.1
3,507,204	+		OLJFJH_16615	0.57	+1.6
3,507,204	+		OLJFJH_16615	0.57	-0.2
3,507,205	-		OLJFJH_16615	0.57	+0.2
3,507,205	-		OLJFJH_16615	0.57	+2.3
3,507,241	+		OLJFJH_16615	0.60	-0.4