Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04990 and OLJFJH_04995 are separated by 71 nucleotides OLJFJH_04995 and OLJFJH_05000 are separated by 73 nucleotides OLJFJH_05000 and OLJFJH_05005 are separated by 471 nucleotides
OLJFJH_04990: OLJFJH_04990 - mannitol-1-phosphate 5-dehydrogenase, at 990,890 to 992,038
_04990
OLJFJH_04995: OLJFJH_04995 - MltR family transcriptional regulator, at 992,110 to 992,655
_04995
OLJFJH_05000: OLJFJH_05000 - YibL family ribosome-associated protein, at 992,729 to 993,091
_05000
OLJFJH_05005: OLJFJH_05005 - DNA-binding response regulator, at 993,563 to 994,186
_05005
Position (kb) 992
993
994 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 991.856 kb on - strand, within OLJFJH_04990 at 992.026 kb on + strand at 992.120 kb on + strand at 992.180 kb on + strand, within OLJFJH_04995 at 992.250 kb on - strand, within OLJFJH_04995 at 992.259 kb on - strand, within OLJFJH_04995 at 992.275 kb on + strand, within OLJFJH_04995 at 992.287 kb on + strand, within OLJFJH_04995 at 992.295 kb on - strand, within OLJFJH_04995 at 992.351 kb on + strand, within OLJFJH_04995 at 992.373 kb on + strand, within OLJFJH_04995 at 992.386 kb on + strand, within OLJFJH_04995 at 992.386 kb on + strand, within OLJFJH_04995 at 992.553 kb on + strand, within OLJFJH_04995 at 992.629 kb on - strand at 992.658 kb on + strand at 992.659 kb on - strand at 992.742 kb on + strand at 992.863 kb on - strand, within OLJFJH_05000 at 993.112 kb on + strand at 993.113 kb on - strand at 993.113 kb on - strand at 993.113 kb on - strand at 993.113 kb on - strand at 993.113 kb on - strand at 993.113 kb on - strand at 993.113 kb on - strand at 993.113 kb on - strand at 993.232 kb on - strand at 993.494 kb on - strand at 993.663 kb on + strand, within OLJFJH_05005 at 993.773 kb on - strand, within OLJFJH_05005 at 993.950 kb on - strand, within OLJFJH_05005 at 993.950 kb on - strand, within OLJFJH_05005 at 993.950 kb on - strand, within OLJFJH_05005
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1 remove 991,856 - OLJFJH_04990 0.84 +0.5 992,026 + +0.3 992,120 + -0.9 992,180 + OLJFJH_04995 0.13 -0.3 992,250 - OLJFJH_04995 0.26 +0.5 992,259 - OLJFJH_04995 0.27 -0.9 992,275 + OLJFJH_04995 0.30 +1.4 992,287 + OLJFJH_04995 0.32 +0.3 992,295 - OLJFJH_04995 0.34 +1.3 992,351 + OLJFJH_04995 0.44 +1.8 992,373 + OLJFJH_04995 0.48 -0.3 992,386 + OLJFJH_04995 0.51 -1.2 992,386 + OLJFJH_04995 0.51 -0.3 992,553 + OLJFJH_04995 0.81 -1.0 992,629 - +0.2 992,658 + +0.8 992,659 - -0.5 992,742 + -2.0 992,863 - OLJFJH_05000 0.37 -1.4 993,112 + -0.1 993,113 - +1.2 993,113 - +0.3 993,113 - -0.3 993,113 - +2.0 993,113 - -0.6 993,113 - +0.3 993,113 - +0.7 993,113 - +1.8 993,232 - -0.6 993,494 - -0.8 993,663 + OLJFJH_05005 0.16 -0.4 993,773 - OLJFJH_05005 0.34 -2.9 993,950 - OLJFJH_05005 0.62 +0.5 993,950 - OLJFJH_05005 0.62 +0.5 993,950 - OLJFJH_05005 0.62 +2.5
Or see this region's nucleotide sequence