Experiment: Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01590 and OLJFJH_01595 are separated by 9 nucleotides OLJFJH_01595 and OLJFJH_01600 are separated by 158 nucleotides OLJFJH_01600 and OLJFJH_01605 are separated by 20 nucleotides
OLJFJH_01590: OLJFJH_01590 - DNA repair protein RadA, at 265,668 to 267,050
_01590
OLJFJH_01595: OLJFJH_01595 - phosphoserine phosphatase, at 267,060 to 268,037
_01595
OLJFJH_01600: OLJFJH_01600 - YtjB family periplasmic protein, at 268,196 to 268,855
_01600
OLJFJH_01605: OLJFJH_01605 - type II toxin-antitoxin system HipA family toxin YjjJ, at 268,876 to 270,216
_01605
Position (kb) 267
268
269 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 266.098 kb on - strand, within OLJFJH_01590 at 266.187 kb on + strand, within OLJFJH_01590 at 266.187 kb on + strand, within OLJFJH_01590 at 266.188 kb on - strand, within OLJFJH_01590 at 266.280 kb on - strand, within OLJFJH_01590 at 266.280 kb on - strand, within OLJFJH_01590 at 266.294 kb on + strand, within OLJFJH_01590 at 266.342 kb on + strand, within OLJFJH_01590 at 266.343 kb on - strand, within OLJFJH_01590 at 266.343 kb on - strand, within OLJFJH_01590 at 266.594 kb on + strand, within OLJFJH_01590 at 266.594 kb on + strand, within OLJFJH_01590 at 266.595 kb on - strand, within OLJFJH_01590 at 266.723 kb on + strand, within OLJFJH_01590 at 267.128 kb on + strand at 267.293 kb on - strand, within OLJFJH_01595 at 267.386 kb on + strand, within OLJFJH_01595 at 267.387 kb on - strand, within OLJFJH_01595 at 267.397 kb on + strand, within OLJFJH_01595 at 267.398 kb on - strand, within OLJFJH_01595 at 267.507 kb on + strand, within OLJFJH_01595 at 267.508 kb on - strand, within OLJFJH_01595 at 267.656 kb on + strand, within OLJFJH_01595 at 267.657 kb on - strand, within OLJFJH_01595 at 267.657 kb on - strand, within OLJFJH_01595 at 267.909 kb on + strand, within OLJFJH_01595 at 268.038 kb on + strand at 268.049 kb on + strand at 268.087 kb on - strand at 268.089 kb on + strand at 268.090 kb on - strand at 268.135 kb on + strand at 268.135 kb on + strand at 268.136 kb on - strand at 268.136 kb on - strand at 268.329 kb on + strand, within OLJFJH_01600 at 268.329 kb on + strand, within OLJFJH_01600 at 268.330 kb on - strand, within OLJFJH_01600 at 268.330 kb on - strand, within OLJFJH_01600 at 268.346 kb on - strand, within OLJFJH_01600 at 268.391 kb on - strand, within OLJFJH_01600 at 268.513 kb on - strand, within OLJFJH_01600 at 268.562 kb on + strand, within OLJFJH_01600 at 268.563 kb on - strand, within OLJFJH_01600 at 268.581 kb on + strand, within OLJFJH_01600 at 268.582 kb on - strand, within OLJFJH_01600 at 268.598 kb on - strand, within OLJFJH_01600 at 268.598 kb on - strand, within OLJFJH_01600 at 268.673 kb on - strand, within OLJFJH_01600 at 268.684 kb on + strand, within OLJFJH_01600 at 268.684 kb on + strand, within OLJFJH_01600 at 268.986 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:Fifi044;Temp:28;Samp:13-1 remove 266,098 - OLJFJH_01590 0.31 -1.4 266,187 + OLJFJH_01590 0.38 -0.8 266,187 + OLJFJH_01590 0.38 +0.5 266,188 - OLJFJH_01590 0.38 +1.2 266,280 - OLJFJH_01590 0.44 +3.0 266,280 - OLJFJH_01590 0.44 -0.0 266,294 + OLJFJH_01590 0.45 -0.2 266,342 + OLJFJH_01590 0.49 -1.2 266,343 - OLJFJH_01590 0.49 +0.1 266,343 - OLJFJH_01590 0.49 +0.1 266,594 + OLJFJH_01590 0.67 +0.1 266,594 + OLJFJH_01590 0.67 -0.6 266,595 - OLJFJH_01590 0.67 +1.0 266,723 + OLJFJH_01590 0.76 -0.9 267,128 + -0.9 267,293 - OLJFJH_01595 0.24 -3.6 267,386 + OLJFJH_01595 0.33 -1.0 267,387 - OLJFJH_01595 0.33 -0.5 267,397 + OLJFJH_01595 0.34 -1.5 267,398 - OLJFJH_01595 0.35 -0.7 267,507 + OLJFJH_01595 0.46 -1.0 267,508 - OLJFJH_01595 0.46 -1.6 267,656 + OLJFJH_01595 0.61 -1.0 267,657 - OLJFJH_01595 0.61 -3.6 267,657 - OLJFJH_01595 0.61 -0.4 267,909 + OLJFJH_01595 0.87 -1.6 268,038 + -2.0 268,049 + -1.8 268,087 - +1.8 268,089 + -0.5 268,090 - +0.5 268,135 + -0.2 268,135 + +0.9 268,136 - -0.4 268,136 - +0.1 268,329 + OLJFJH_01600 0.20 +0.6 268,329 + OLJFJH_01600 0.20 -1.5 268,330 - OLJFJH_01600 0.20 -0.1 268,330 - OLJFJH_01600 0.20 -0.4 268,346 - OLJFJH_01600 0.23 +0.4 268,391 - OLJFJH_01600 0.30 +0.9 268,513 - OLJFJH_01600 0.48 +0.0 268,562 + OLJFJH_01600 0.55 -1.0 268,563 - OLJFJH_01600 0.56 +4.6 268,581 + OLJFJH_01600 0.58 -0.1 268,582 - OLJFJH_01600 0.58 +1.0 268,598 - OLJFJH_01600 0.61 -0.3 268,598 - OLJFJH_01600 0.61 +0.2 268,673 - OLJFJH_01600 0.72 +0.1 268,684 + OLJFJH_01600 0.74 +0.5 268,684 + OLJFJH_01600 0.74 -0.3 268,986 + -0.6
Or see this region's nucleotide sequence