Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18915

Experiment: Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)
3,567,251	-		LU632_RS18910	0.35	-0.9
3,567,251	-		LU632_RS18910	0.35	-1.2
3,567,311	-		LU632_RS18910	0.47	-0.4
3,567,732	-				+1.6
3,567,768	+				+1.1
3,567,769	-				+0.9
3,567,769	-				+1.0
3,568,101	+				-1.1
3,568,719	-				+0.2
3,568,745	+				-0.8
3,568,759	+				-0.2
3,568,760	-				-1.8
3,568,776	+				+0.4
3,568,776	+				-0.4
3,568,777	-				+2.4
3,568,824	-				+1.2
3,568,848	+				-1.1
3,568,848	+				-0.0
3,568,873	+				-1.5
3,568,893	-				+1.9
3,568,897	-				-0.9
3,568,901	+				+2.1
3,568,936	-				-0.1
3,568,937	-				-3.5
3,568,961	-				-1.4
3,568,977	-				+0.0
3,569,019	-				+0.4
3,569,019	-				-0.7
3,569,044	+				-0.2
3,569,059	+				-0.1
3,569,227	+				+2.2
3,569,228	-				-0.1
3,569,228	-				+1.0
3,569,228	-				-0.5
3,569,270	+				+0.4
3,569,301	+				-0.5
3,569,301	+				-3.0
3,569,309	-				+2.0
3,569,316	-				-1.4
3,569,323	-				+0.5
3,569,337	-				+0.2
3,569,337	-				-2.5
3,569,477	+				-1.5
3,569,481	+				-1.1
3,569,562	+				-2.4
3,569,569	-				-1.4
3,569,634	-				-2.1
3,569,638	+				-1.2
3,569,639	-				+0.5