Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18525

Experiment: Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)
3,501,191	-				+1.5
3,501,194	+				+2.4
3,501,204	+				+0.0
3,501,204	+				+1.3
3,501,216	+				-0.8
3,501,216	+				+1.2
3,501,269	+				-1.3
3,501,269	+				+1.0
3,501,270	-				+0.6
3,501,357	+				+0.3
3,501,357	+				-2.0
3,501,358	-				-0.3
3,501,394	+				-0.7
3,501,395	-				+0.7
3,501,395	-				-2.6
3,501,395	-				+0.5
3,501,402	+				-0.5
3,501,402	+				+0.5
3,501,402	+				-1.4
3,501,403	-				+1.7
3,501,502	+		LU632_RS18520	0.21	-0.7
3,501,604	+		LU632_RS18520	0.41	-0.5
3,501,605	-		LU632_RS18520	0.41	-1.1
3,501,671	+		LU632_RS18520	0.54	+1.6
3,501,710	-		LU632_RS18520	0.62	-0.5
3,501,766	+		LU632_RS18520	0.73	-0.7
3,501,767	-		LU632_RS18520	0.73	+2.7
3,501,767	-		LU632_RS18520	0.73	-1.8
3,501,868	+				+2.8
3,501,961	-				+0.0
3,501,964	+				+1.6
3,502,097	-		LU632_RS18525	0.79	-1.3
3,502,097	-		LU632_RS18525	0.79	+0.5
3,502,099	-		LU632_RS18525	0.80	-2.8
3,502,099	-		LU632_RS18525	0.80	+0.9
3,502,187	+				+1.0
3,502,202	+				+0.9
3,502,202	+				-1.5
3,502,272	-				+0.1
3,502,519	-		LU632_RS18530	0.32	+0.5
3,502,986	+				+0.6