Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16155

Experiment: Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)
3,052,976	-				-1.1
3,053,004	+				+0.6
3,053,004	+				+0.7
3,053,018	+				-0.1
3,053,018	+				+2.2
3,053,018	+				-1.3
3,053,019	-				-0.6
3,053,019	-				-0.4
3,053,019	-				+2.3
3,053,019	-				-0.2
3,053,019	-				-0.6
3,053,019	-				-2.1
3,053,019	-				-2.2
3,053,023	-				+1.0
3,053,039	-				-2.2
3,053,130	-				-0.3
3,053,334	+		LU632_RS16150	0.33	+1.1
3,053,447	-		LU632_RS16150	0.49	+0.5
3,053,447	-		LU632_RS16150	0.49	-0.2
3,053,482	+		LU632_RS16150	0.53	+0.9
3,053,605	+		LU632_RS16150	0.70	+0.3
3,053,605	+		LU632_RS16150	0.70	+1.5
3,053,647	+		LU632_RS16150	0.75	+0.3
3,054,068	-				-1.2
3,054,171	+	phrB	LU632_RS16155	0.16	-0.2
3,054,245	+	phrB	LU632_RS16155	0.21	+0.3
3,054,246	-	phrB	LU632_RS16155	0.21	-0.6
3,054,261	+	phrB	LU632_RS16155	0.22	-1.2
3,054,261	+	phrB	LU632_RS16155	0.22	+0.8
3,054,261	+	phrB	LU632_RS16155	0.22	-0.7
3,054,261	+	phrB	LU632_RS16155	0.22	+0.3
3,054,262	-	phrB	LU632_RS16155	0.22	+2.8
3,054,262	-	phrB	LU632_RS16155	0.22	+0.2
3,054,356	-	phrB	LU632_RS16155	0.29	+0.3
3,054,503	+	phrB	LU632_RS16155	0.39	-0.5
3,054,553	+	phrB	LU632_RS16155	0.43	-0.5
3,054,637	-	phrB	LU632_RS16155	0.49	+1.3
3,054,841	+	phrB	LU632_RS16155	0.63	-2.5
3,054,842	-	phrB	LU632_RS16155	0.63	+2.2
3,054,899	-	phrB	LU632_RS16155	0.67	+0.1
3,054,912	-	phrB	LU632_RS16155	0.68	-2.2
3,054,918	+	phrB	LU632_RS16155	0.68	+0.3
3,054,918	+	phrB	LU632_RS16155	0.68	-0.8
3,054,918	+	phrB	LU632_RS16155	0.68	-0.0
3,054,918	+	phrB	LU632_RS16155	0.68	-1.2
3,054,918	+	phrB	LU632_RS16155	0.68	-0.2
3,054,918	+	phrB	LU632_RS16155	0.68	+1.0
3,054,919	-	phrB	LU632_RS16155	0.68	-0.5
3,054,919	-	phrB	LU632_RS16155	0.68	-0.7
3,054,989	-	phrB	LU632_RS16155	0.73	-0.4
3,055,050	+	phrB	LU632_RS16155	0.78	-2.2
3,055,056	+	phrB	LU632_RS16155	0.78	+0.3
3,055,056	+	phrB	LU632_RS16155	0.78	+0.9
3,055,057	-	phrB	LU632_RS16155	0.78	+1.4
3,055,060	+	phrB	LU632_RS16155	0.78	+0.9
3,055,060	+	phrB	LU632_RS16155	0.78	+1.8
3,055,061	-	phrB	LU632_RS16155	0.78	+0.1
3,055,061	-	phrB	LU632_RS16155	0.78	-2.2
3,055,063	-	phrB	LU632_RS16155	0.79	+0.1
3,055,079	-	phrB	LU632_RS16155	0.80	-1.0
3,055,082	-	phrB	LU632_RS16155	0.80	+0.0
3,055,148	+	phrB	LU632_RS16155	0.85	-1.2
3,055,201	-	phrB	LU632_RS16155	0.88	-3.7
3,055,261	+				-1.7
3,055,315	+				+0.4
3,055,315	+				+0.0
3,055,316	-				-0.6
3,055,316	-				-2.5
3,055,316	-				+0.3
3,055,476	+				-0.8
3,055,476	+				+0.1
3,055,476	+				+2.3
3,055,476	+				-0.7
3,055,476	+				-0.7
3,055,477	-				-1.7
3,055,477	-				+0.3
3,055,477	-				+0.8
3,055,531	+		LU632_RS16160	0.15	-2.2
3,055,532	-		LU632_RS16160	0.15	+1.8
3,055,642	+		LU632_RS16160	0.27	+0.5
3,055,642	+		LU632_RS16160	0.27	-0.1
3,055,680	+		LU632_RS16160	0.31	+0.4
3,055,681	-		LU632_RS16160	0.31	+0.9
3,055,727	+		LU632_RS16160	0.35	+0.0
3,055,737	+		LU632_RS16160	0.36	-3.1
3,055,848	+		LU632_RS16160	0.48	-1.7
3,055,933	+		LU632_RS16160	0.57	-0.7
3,056,039	+		LU632_RS16160	0.68	-1.7
3,056,040	-		LU632_RS16160	0.68	+1.0
3,056,040	-		LU632_RS16160	0.68	-1.2
3,056,157	-		LU632_RS16160	0.80	+0.3
3,056,234	-		LU632_RS16160	0.88	+0.3
3,056,351	-				-2.5