Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16030

Experiment: Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)
3,027,669	+	cpoB	LU632_RS16020	0.46	-1.8
3,027,670	-	cpoB	LU632_RS16020	0.46	-0.1
3,027,670	-	cpoB	LU632_RS16020	0.46	+0.7
3,027,670	-	cpoB	LU632_RS16020	0.46	+2.6
3,027,712	+	cpoB	LU632_RS16020	0.51	-0.1
3,027,831	-	cpoB	LU632_RS16020	0.67	-3.1
3,027,846	+	cpoB	LU632_RS16020	0.68	-0.5
3,027,881	+	cpoB	LU632_RS16020	0.73	+0.5
3,027,881	+	cpoB	LU632_RS16020	0.73	+0.3
3,027,882	-	cpoB	LU632_RS16020	0.73	+0.3
3,027,882	-	cpoB	LU632_RS16020	0.73	-2.5
3,027,882	-	cpoB	LU632_RS16020	0.73	-1.8
3,027,882	-	cpoB	LU632_RS16020	0.73	-2.3
3,027,884	-	cpoB	LU632_RS16020	0.73	-2.5
3,027,950	-	cpoB	LU632_RS16020	0.82	+1.1
3,028,085	-				+0.3
3,028,643	-				-2.8
3,028,651	-				+0.3
3,028,651	-				-0.2
3,029,987	-				+1.1
3,029,991	-				+0.2
3,029,991	-				-0.3
3,030,022	-				+2.3
3,030,022	-				+2.3
3,030,022	-				+0.9
3,030,022	-				-0.7
3,030,022	-				+0.3