Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04685

Experiment: Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)
917,744	+				+2.0
917,811	+		LU632_RS04685	0.24	+1.0
917,811	+		LU632_RS04685	0.24	-1.5
917,938	-		LU632_RS04685	0.58	-1.0
917,938	-		LU632_RS04685	0.58	-2.4
917,985	+		LU632_RS04685	0.71	-0.3
917,985	+		LU632_RS04685	0.71	-0.6
917,985	+		LU632_RS04685	0.71	-0.5
917,985	+		LU632_RS04685	0.71	+1.0
917,986	-		LU632_RS04685	0.72	-1.1
917,986	-		LU632_RS04685	0.72	-2.1
917,992	-		LU632_RS04685	0.73	+0.2
918,120	+				+0.8
918,207	+		LU632_RS04690	0.14	-0.5
918,231	+		LU632_RS04690	0.17	-0.2
918,353	+		LU632_RS04690	0.33	-2.7
918,354	-		LU632_RS04690	0.33	+0.3
918,508	+		LU632_RS04690	0.53	+1.4
918,508	+		LU632_RS04690	0.53	-2.2
918,508	+		LU632_RS04690	0.53	-0.5
918,508	+		LU632_RS04690	0.53	-1.5
918,509	-		LU632_RS04690	0.53	+1.8
918,509	-		LU632_RS04690	0.53	+0.1
918,640	-		LU632_RS04690	0.69	+0.4
918,889	+				+2.7
918,890	-				-0.9
918,890	-				+1.0
918,911	+				-2.3
918,931	+				+1.5
918,932	-				+0.1
918,932	-				-0.5
918,975	-				+1.7
918,975	-				-1.2
918,977	+				-2.1
919,039	+				-1.1
919,054	+				-2.9
919,073	-				-0.3