Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04650

Experiment: Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)
909,319	+	glk	LU632_RS04645	0.83	-1.1
909,319	+	glk	LU632_RS04645	0.83	-1.2
909,320	-	glk	LU632_RS04645	0.83	-0.9
909,320	-	glk	LU632_RS04645	0.83	+0.5
909,323	-	glk	LU632_RS04645	0.83	-0.3
909,345	+	glk	LU632_RS04645	0.85	-0.0
909,477	+				-1.5
909,478	-				+0.7
909,488	+				+2.5
909,489	-				+0.9
909,490	+				+0.5
909,592	+				+0.3
909,626	-				-0.6
909,629	+				+0.4
909,629	+				-0.4
909,629	+				+0.2
909,629	+				+1.3
909,629	+				-1.8
909,629	+				+1.1
909,629	+				+1.5
909,629	+				+0.2
909,629	+				-1.4
909,629	+				+0.7
909,629	+				+1.4
909,632	-				-2.8
909,633	+				-0.2
909,633	+				+0.2
909,644	-				+0.5
909,785	+				-2.3
909,860	+				+0.9
909,926	+				-0.5
909,927	-				-0.2
909,950	+				+1.3
909,969	+				-0.2
909,969	+				-1.4
909,973	+				+1.4
909,974	-				+1.3
909,993	+				+0.2
909,993	+				-0.5
910,073	-				+0.8
910,093	+				-0.4
910,093	+				-1.3
910,094	-				+0.2
910,171	+				+1.0
910,172	-				+1.8
910,272	-		LU632_RS04650	0.15	+0.1
910,423	+		LU632_RS04650	0.47	+0.9
910,473	-		LU632_RS04650	0.58	+1.5
910,482	-		LU632_RS04650	0.60	+0.5
910,670	+				+0.3
910,671	-				+1.7
910,680	+				-0.0
910,716	-				+0.8
911,509	+				+0.5
911,572	+				+0.5
911,572	+				+1.4
911,572	+				+2.8
911,572	+				+0.5
911,573	-				+0.3
911,573	-				+0.4
911,573	-				-0.0