Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS02650

Experiment: Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 6 Petiole 1 (TE2-S-C6-P1)
529,943	+				-0.0
529,956	+				+0.8
529,999	+				-3.7
530,065	-				-0.2
530,081	+				-0.1
530,117	+				-1.7
530,267	-				-0.6
530,270	+				+1.6
530,271	-				+0.6
530,294	+				-1.4
530,294	+				+1.2
530,302	-				+2.7
530,334	+				+1.0
530,373	-				+1.2
530,428	+	satP	LU632_RS02650	0.17	-0.3
530,429	-	satP	LU632_RS02650	0.17	-3.1
530,457	-	satP	LU632_RS02650	0.22	+0.5
530,462	-	satP	LU632_RS02650	0.23	-0.9
530,504	+	satP	LU632_RS02650	0.30	-0.0
530,504	+	satP	LU632_RS02650	0.30	-2.2
530,656	+	satP	LU632_RS02650	0.57	+1.2
530,729	-	satP	LU632_RS02650	0.69	+0.6
530,902	+				+3.0
530,903	-				-0.8
530,903	-				+1.2
530,903	-				+0.0
530,943	+				+1.1
530,988	-				-0.7
530,988	-				+0.0
530,990	+				-4.0
531,157	+				-1.9
531,157	+				-0.5
531,157	+				-0.0
531,157	+				-0.5
531,157	+				-0.9
531,157	+				-1.5