Strain Fitness in Bacteroides stercoris CC31F around HMPREF1181_RS04410

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/mL (C)
118,699	-				+0.0
118,716	+				-2.4
118,817	+				-1.8
118,850	-				+1.1
118,850	-				-0.4
118,890	-				-0.8
118,916	+				-0.3
118,929	-				+0.1
118,939	-				+0.0
118,939	-				-0.0
118,984	+				-2.1
119,047	+				-2.0
119,084	+		HMPREF1181_RS04405	0.13	-0.5
119,090	-		HMPREF1181_RS04405	0.14	-2.0
119,135	+		HMPREF1181_RS04405	0.21	-2.6
119,144	+		HMPREF1181_RS04405	0.22	-1.8
119,145	-		HMPREF1181_RS04405	0.22	-1.4
119,145	-		HMPREF1181_RS04405	0.22	-1.9
119,156	+		HMPREF1181_RS04405	0.24	-2.3
119,225	-		HMPREF1181_RS04405	0.35	-0.5
119,236	-		HMPREF1181_RS04405	0.37	-1.0
119,278	+		HMPREF1181_RS04405	0.43	-1.8
119,366	+		HMPREF1181_RS04405	0.57	-2.1
119,382	-		HMPREF1181_RS04405	0.60	-2.9
119,418	-		HMPREF1181_RS04405	0.65	-1.9
119,418	-		HMPREF1181_RS04405	0.65	-0.4
119,418	-		HMPREF1181_RS04405	0.65	-0.5
119,421	+		HMPREF1181_RS04405	0.66	-2.3
119,422	-		HMPREF1181_RS04405	0.66	-0.8
119,501	+		HMPREF1181_RS04405	0.78	-2.8
119,502	-		HMPREF1181_RS04405	0.79	-0.5
119,502	-		HMPREF1181_RS04405	0.79	-2.1
119,563	+		HMPREF1181_RS04405	0.88	-0.9
119,607	+				-2.2
119,658	-				-0.6
119,662	-				-0.5
119,669	+				-2.1
119,670	-				+0.3
119,697	+				-0.8
119,698	-				-0.7
119,708	-				-0.8
119,737	-				-0.2
119,745	+		HMPREF1181_RS04410	0.12	-1.4
119,749	-		HMPREF1181_RS04410	0.13	+0.1
119,802	-		HMPREF1181_RS04410	0.24	-0.6
119,830	+		HMPREF1181_RS04410	0.30	-0.6
119,842	+		HMPREF1181_RS04410	0.33	-0.5
119,849	-		HMPREF1181_RS04410	0.34	-0.7
119,849	-		HMPREF1181_RS04410	0.34	-0.2
119,889	-		HMPREF1181_RS04410	0.43	-0.6
119,929	+		HMPREF1181_RS04410	0.52	-0.6
120,075	-		HMPREF1181_RS04410	0.83	-0.4
120,088	+		HMPREF1181_RS04410	0.86	-0.8
120,088	+		HMPREF1181_RS04410	0.86	-0.7
120,093	-		HMPREF1181_RS04410	0.87	-0.9
120,179	+				-0.9
120,179	+				-0.6
120,180	-				-2.5
120,208	+				-0.9
120,234	+				-1.0
120,243	+				-0.5
120,244	-				-2.7
120,342	+		HMPREF1181_RS04415	0.26	-0.7
120,385	+		HMPREF1181_RS04415	0.34	-0.6
120,486	+		HMPREF1181_RS04415	0.52	-1.1
120,486	+		HMPREF1181_RS04415	0.52	-0.9
120,486	+		HMPREF1181_RS04415	0.52	-0.5
120,487	-		HMPREF1181_RS04415	0.52	-1.9
120,494	-		HMPREF1181_RS04415	0.53	-3.1
120,532	+		HMPREF1181_RS04415	0.60	-1.2
120,573	+		HMPREF1181_RS04415	0.68	-0.6
120,615	+		HMPREF1181_RS04415	0.75	-0.8
120,615	+		HMPREF1181_RS04415	0.75	-1.0
120,617	+		HMPREF1181_RS04415	0.76	-0.6
120,618	-		HMPREF1181_RS04415	0.76	-1.7
120,674	-		HMPREF1181_RS04415	0.86	-1.9
120,690	+		HMPREF1181_RS04415	0.89	-0.6
120,691	-		HMPREF1181_RS04415	0.89	-2.4
120,692	+		HMPREF1181_RS04415	0.89	-0.4
120,720	+				-0.1
120,767	-				-0.7
120,845	-				+0.2
120,887	-				-3.0
120,925	+				-0.8
120,988	+				-0.7
120,988	+				-0.5
120,989	-				-1.1
121,006	-				+0.6
121,007	+				-0.6
121,050	+				-0.3
121,099	+				+0.1
121,100	-				+0.6
121,104	-				+0.9
121,105	+				+0.3
121,120	-				+2.5
121,146	+				-1.5
121,147	-				-0.1