Strain Fitness in Bacteroides stercoris CC31F around HMPREF1181_RS10690

Experiment: Amylose from potato 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Amylose from potato 2.5 mg/mL (C)
122,482	-		HMPREF1181_RS10685	0.56	-0.5
122,487	+		HMPREF1181_RS10685	0.57	-0.8
122,487	+		HMPREF1181_RS10685	0.57	-1.4
122,487	+		HMPREF1181_RS10685	0.57	-0.9
122,528	-		HMPREF1181_RS10685	0.59	-0.0
122,676	+		HMPREF1181_RS10685	0.68	-0.8
122,677	-		HMPREF1181_RS10685	0.68	+1.3
122,852	+		HMPREF1181_RS10685	0.78	-1.5
122,853	-		HMPREF1181_RS10685	0.78	+2.0
122,925	+		HMPREF1181_RS10685	0.82	+0.0
122,926	-		HMPREF1181_RS10685	0.83	-1.3
122,960	-		HMPREF1181_RS10685	0.85	+0.4
122,982	-		HMPREF1181_RS10685	0.86	+0.4
123,044	+		HMPREF1181_RS10685	0.89	+1.3
123,161	+				+0.2
123,208	+				+0.0
123,214	+				-1.4
123,229	-				+0.5
123,259	+				+0.7
123,332	+				-0.9
123,510	+				-0.6
123,558	+		HMPREF1181_RS10690	0.13	-1.9
123,559	-		HMPREF1181_RS10690	0.13	-0.6
123,583	+		HMPREF1181_RS10690	0.16	+0.4
123,604	-		HMPREF1181_RS10690	0.17	-0.7
123,604	-		HMPREF1181_RS10690	0.17	-1.0
123,641	+		HMPREF1181_RS10690	0.21	+0.9
123,655	-		HMPREF1181_RS10690	0.22	+0.3
123,690	+		HMPREF1181_RS10690	0.25	+0.6
123,753	-		HMPREF1181_RS10690	0.31	+1.1
123,753	-		HMPREF1181_RS10690	0.31	+1.0
123,801	-		HMPREF1181_RS10690	0.35	-1.2
123,801	-		HMPREF1181_RS10690	0.35	+0.6
123,827	+		HMPREF1181_RS10690	0.38	+0.2
123,827	+		HMPREF1181_RS10690	0.38	+0.7
123,827	+		HMPREF1181_RS10690	0.38	+0.9
123,828	-		HMPREF1181_RS10690	0.38	+0.9
124,027	-		HMPREF1181_RS10690	0.56	-1.7
124,039	+		HMPREF1181_RS10690	0.57	-0.7
124,054	+		HMPREF1181_RS10690	0.58	-0.3
124,066	-		HMPREF1181_RS10690	0.59	+0.7
124,066	-		HMPREF1181_RS10690	0.59	+0.3
124,130	+		HMPREF1181_RS10690	0.65	-0.4
124,160	+		HMPREF1181_RS10690	0.68	+0.6
124,272	+		HMPREF1181_RS10690	0.78	+1.0
124,272	+		HMPREF1181_RS10690	0.78	+0.7
124,272	+		HMPREF1181_RS10690	0.78	+0.3
124,273	-		HMPREF1181_RS10690	0.78	+0.1
124,273	-		HMPREF1181_RS10690	0.78	+0.3
124,381	+		HMPREF1181_RS10690	0.88	+0.2
124,409	+				+0.8
124,410	-				-0.7
124,410	-				-0.5
124,465	-				+0.1
124,466	+				+1.8
124,516	-				+1.5
124,516	-				+0.5
124,592	+				+1.2
124,594	+				-1.3
124,594	+				+0.3
124,614	-				-0.3
124,666	+				-0.9
124,676	-				-0.1
124,676	-				+0.0
124,679	+				+0.4
124,680	-				-0.3
124,740	+				+1.1
124,790	-		HMPREF1181_RS10695	0.13	-0.9
124,862	-		HMPREF1181_RS10695	0.19	+0.2
124,904	+		HMPREF1181_RS10695	0.22	+1.4
124,905	-		HMPREF1181_RS10695	0.22	+0.1
124,905	-		HMPREF1181_RS10695	0.22	-1.5
124,954	-		HMPREF1181_RS10695	0.27	-0.4
124,994	+		HMPREF1181_RS10695	0.30	-1.8
125,146	+		HMPREF1181_RS10695	0.42	+0.9
125,146	+		HMPREF1181_RS10695	0.42	+1.9
125,147	-		HMPREF1181_RS10695	0.42	+0.7
125,166	+		HMPREF1181_RS10695	0.44	-1.3
125,167	-		HMPREF1181_RS10695	0.44	+0.9
125,196	+		HMPREF1181_RS10695	0.46	-0.6
125,203	+		HMPREF1181_RS10695	0.47	+0.3
125,203	+		HMPREF1181_RS10695	0.47	-0.3
125,204	-		HMPREF1181_RS10695	0.47	-0.6
125,217	+		HMPREF1181_RS10695	0.48	-0.2
125,226	-		HMPREF1181_RS10695	0.49	-0.5
125,289	+		HMPREF1181_RS10695	0.54	-4.1
125,368	+		HMPREF1181_RS10695	0.61	-2.0
125,403	-		HMPREF1181_RS10695	0.63	-0.6
125,421	-		HMPREF1181_RS10695	0.65	-1.8
125,489	+		HMPREF1181_RS10695	0.71	+0.6