Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS25295

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
4,809,041	-		LU632_RS25290	0.21	+0.3
4,809,063	+		LU632_RS25290	0.25	-1.1
4,809,096	-		LU632_RS25290	0.32	+1.1
4,809,120	+		LU632_RS25290	0.36	-0.1
4,809,120	+		LU632_RS25290	0.36	-0.2
4,809,121	-		LU632_RS25290	0.36	+0.8
4,809,224	+		LU632_RS25290	0.56	-0.3
4,809,224	+		LU632_RS25290	0.56	+2.4
4,809,225	-		LU632_RS25290	0.56	+0.9
4,809,327	+		LU632_RS25290	0.76	-1.6
4,809,327	-		LU632_RS25290	0.76	-1.4
4,809,386	-		LU632_RS25290	0.87	-1.9
4,809,386	-		LU632_RS25290	0.87	-1.1
4,809,389	-		LU632_RS25290	0.88	-1.8
4,809,412	-				-0.7
4,809,414	-				-1.1
4,809,414	-				-0.1
4,809,414	-				-1.7
4,809,488	+				-0.2
4,809,545	+				-2.3
4,809,548	+				+1.0
4,809,674	-				+0.1
4,809,674	-				+2.1
4,809,744	-				-3.5
4,809,762	+				+0.2
4,809,774	-				+1.2
4,809,800	-				+1.9
4,809,808	+				+1.8
4,809,809	-				+0.9
4,809,810	+				+0.8
4,809,811	-				-0.1
4,809,812	+				-0.2
4,809,812	+				+2.0
4,809,813	-				+0.9
4,809,813	-				-0.4
4,809,891	-				-2.3
4,809,891	-				+1.7
4,810,741	-				-2.2
4,810,743	+				-0.4
4,810,743	+				-0.0
4,810,744	-				+0.7
4,810,783	+				-4.5
4,810,817	+				-0.4
4,810,818	-				-0.8
4,810,818	-				-2.3
4,810,832	-				+0.7
4,810,834	-				+0.1
4,810,834	-				+0.3
4,810,862	+				+1.2
4,810,911	+				-1.7
4,810,914	-				-1.1
4,810,914	-				+0.1
4,810,914	-				+1.3
4,810,914	-				-0.6
4,810,944	+				+0.6
4,810,961	+				-1.5
4,811,060	-				-0.5
4,811,065	+				+2.4