Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24340

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
4,643,121	+				+1.6
4,643,121	+				+0.3
4,643,164	-				-0.0
4,643,256	-				-1.1
4,643,353	+		LU632_RS24335	0.18	-2.5
4,643,354	-		LU632_RS24335	0.19	-1.3
4,643,354	-		LU632_RS24335	0.19	-0.7
4,643,420	+		LU632_RS24335	0.34	-2.5
4,643,441	+		LU632_RS24335	0.39	+0.1
4,643,441	+		LU632_RS24335	0.39	+0.6
4,643,441	+		LU632_RS24335	0.39	-1.5
4,643,468	+		LU632_RS24335	0.46	-0.1
4,643,468	+		LU632_RS24335	0.46	+3.1
4,643,529	+		LU632_RS24335	0.60	-0.3
4,643,551	+		LU632_RS24335	0.65	+0.7
4,643,551	+		LU632_RS24335	0.65	+0.6
4,643,866	-		LU632_RS24340	0.17	+0.4
4,644,088	-		LU632_RS24340	0.54	+0.2
4,644,090	+		LU632_RS24340	0.54	-0.2
4,644,702	+		LU632_RS24345	0.80	+0.7
4,644,797	-				+0.3
4,644,801	+				-1.7
4,644,865	+				-0.0
4,644,925	+				+0.6
4,645,016	+				-1.9
4,645,017	-				+1.7
4,645,017	-				-0.4
4,645,089	+				-1.1
4,645,099	+				-1.7
4,645,099	+				-0.1
4,645,105	+				-0.9
4,645,234	+				-0.9
4,645,249	+				-0.1
4,645,249	+				+1.4
4,645,283	-				-1.4