Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20285

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
3,858,840	+				+0.5
3,858,841	-				+0.5
3,858,841	-				+0.8
3,858,845	-				-1.7
3,859,040	+				+1.0
3,859,436	-				+0.0
3,859,787	+		LU632_RS20285	0.14	-1.5
3,859,884	+		LU632_RS20285	0.38	+0.5
3,860,046	-		LU632_RS20285	0.78	+1.6
3,860,173	+				-2.2
3,860,286	+				-0.3
3,860,406	+		LU632_RS20290	0.32	+2.0
3,860,407	-		LU632_RS20290	0.32	-0.6
3,860,922	+		LU632_RS20295	0.11	-3.7
3,861,039	+		LU632_RS20295	0.27	+0.7