Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19095

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
3,602,488	+		LU632_RS19085	0.55	+0.3
3,602,653	+		LU632_RS19085	0.71	-3.7
3,602,653	+		LU632_RS19085	0.71	+1.1
3,602,698	-		LU632_RS19085	0.76	-0.1
3,602,740	-		LU632_RS19085	0.80	-1.2
3,602,740	-		LU632_RS19085	0.80	-0.7
3,602,845	+		LU632_RS19085	0.90	-1.9
3,602,845	+		LU632_RS19085	0.90	+1.6
3,602,886	+				+0.3
3,603,035	-				+1.2
3,603,057	+		LU632_RS19090	0.14	+1.1
3,603,080	+		LU632_RS19090	0.24	-0.2
3,603,080	+		LU632_RS19090	0.24	-0.4
3,603,081	-		LU632_RS19090	0.25	+0.8
3,603,082	+		LU632_RS19090	0.25	+1.0
3,603,082	+		LU632_RS19090	0.25	-0.5
3,603,091	-		LU632_RS19090	0.29	-1.8
3,603,144	+		LU632_RS19090	0.52	+4.9
3,603,145	-		LU632_RS19090	0.53	+0.1
3,603,292	+				-1.8
3,603,371	+				-0.8
3,603,426	-		LU632_RS19095	0.18	+0.7
3,603,544	+		LU632_RS19095	0.38	+0.4
3,603,576	-		LU632_RS19095	0.44	-0.3
3,603,906	+				+0.0
3,603,930	-				-1.9
3,603,936	+				+2.7
3,603,957	-				+0.9
3,604,000	-				+1.0
3,604,514	+		LU632_RS19100	0.23	+0.8
3,604,574	-		LU632_RS19100	0.62	+0.4
3,604,574	-		LU632_RS19100	0.62	+2.4
3,604,675	+				+1.1
3,604,826	+				+0.9
3,604,828	+				+0.8
3,604,828	+				-0.4
3,604,828	+				-0.6
3,604,828	+				+3.7
3,604,829	-				-2.9
3,604,832	+				+1.0
3,604,869	-				-0.2
3,604,869	-				-0.2
3,604,869	-				+2.2