Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18585

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
3,515,006	+				+1.6
3,515,053	+				+1.5
3,515,202	+				-1.3
3,515,231	+				+0.0
3,515,425	+				+1.7
3,515,597	+		LU632_RS18585	0.27	-1.7
3,515,652	-		LU632_RS18585	0.37	-3.2
3,515,904	-		LU632_RS18585	0.82	+1.6
3,515,974	-				-0.0
3,516,114	+				+1.1
3,516,114	+				+0.3
3,516,115	-				+0.1
3,516,132	+				+0.3
3,516,189	+				+0.6
3,516,581	-	nrdR	LU632_RS18590	0.73	+0.6
3,516,623	+	nrdR	LU632_RS18590	0.82	-1.7
3,516,625	+	nrdR	LU632_RS18590	0.82	-0.5
3,516,706	+				+0.6