Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18040

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
3,407,146	+				-0.1
3,407,156	-				-3.2
3,407,176	-				+0.5
3,407,183	-				+1.2
3,407,185	+				-0.3
3,407,202	+				-0.6
3,407,263	+				+0.5
3,407,299	+				+0.9
3,407,300	-				+0.2
3,407,499	+		LU632_RS18030	0.65	+0.8
3,407,603	+				-1.2
3,407,606	+				-0.5
3,407,606	+				-0.4
3,407,606	+				-3.0
3,407,607	-				-2.5
3,407,608	+				-1.4
3,407,609	-				+0.7
3,407,617	+				+3.0
3,407,617	+				+1.7
3,407,853	+				+1.5
3,407,863	-				-2.0
3,407,943	-				+1.0
3,408,023	+				+0.1
3,408,023	+				-1.2
3,408,081	+				+0.5
3,408,087	-				-3.3
3,408,126	-		LU632_RS18040	0.17	-0.8
3,408,127	+		LU632_RS18040	0.17	+1.8
3,408,128	-		LU632_RS18040	0.18	-2.9
3,408,199	-		LU632_RS18040	0.34	+1.5
3,408,202	+		LU632_RS18040	0.34	-1.2
3,408,202	+		LU632_RS18040	0.34	+0.3
3,408,203	-		LU632_RS18040	0.34	+0.4
3,408,352	+		LU632_RS18040	0.68	+1.2
3,408,922	+		LU632_RS18045	0.74	+0.3