Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15320

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
2,901,917	-		LU632_RS15315	0.24	-1.9
2,901,954	-		LU632_RS15315	0.28	+1.2
2,901,956	-		LU632_RS15315	0.28	+1.4
2,901,956	-		LU632_RS15315	0.28	+1.2
2,902,002	+		LU632_RS15315	0.32	+1.0
2,902,002	+		LU632_RS15315	0.32	+0.4
2,902,006	-		LU632_RS15315	0.32	-2.3
2,902,059	-		LU632_RS15315	0.37	-3.4
2,902,059	-		LU632_RS15315	0.37	-1.6
2,902,059	-		LU632_RS15315	0.37	+1.4
2,902,172	+		LU632_RS15315	0.47	+0.3
2,902,199	+		LU632_RS15315	0.49	-0.6
2,902,264	+		LU632_RS15315	0.55	+0.6
2,902,264	+		LU632_RS15315	0.55	-0.2
2,902,264	+		LU632_RS15315	0.55	-0.2
2,902,264	+		LU632_RS15315	0.55	+1.2
2,902,264	+		LU632_RS15315	0.55	+0.3
2,902,264	+		LU632_RS15315	0.55	-0.3
2,902,265	-		LU632_RS15315	0.55	-1.6
2,902,265	-		LU632_RS15315	0.55	+1.1
2,902,265	-		LU632_RS15315	0.55	+1.1
2,902,265	-		LU632_RS15315	0.55	-1.2
2,902,265	-		LU632_RS15315	0.55	+0.4
2,902,265	-		LU632_RS15315	0.55	-1.7
2,902,266	+		LU632_RS15315	0.55	-2.0
2,902,266	+		LU632_RS15315	0.55	+0.6
2,902,266	+		LU632_RS15315	0.55	+1.0
2,902,267	-		LU632_RS15315	0.55	+0.4
2,902,290	-		LU632_RS15315	0.57	-1.8
2,902,291	+		LU632_RS15315	0.57	+0.9
2,902,292	-		LU632_RS15315	0.57	+1.0
2,902,450	+		LU632_RS15315	0.71	-0.2
2,902,452	+		LU632_RS15315	0.71	+0.7
2,902,453	-		LU632_RS15315	0.71	-1.0
2,902,531	-		LU632_RS15315	0.78	+0.6
2,902,533	+		LU632_RS15315	0.78	+0.6
2,902,630	+		LU632_RS15315	0.87	+0.1
2,902,631	-		LU632_RS15315	0.87	-1.7
2,902,631	-		LU632_RS15315	0.87	-0.3
2,902,631	-		LU632_RS15315	0.87	+2.4
2,902,632	+		LU632_RS15315	0.87	+0.0
2,902,633	-		LU632_RS15315	0.87	+1.1
2,902,642	+		LU632_RS15315	0.88	-0.3
2,902,645	+		LU632_RS15315	0.88	-1.2
2,902,646	-		LU632_RS15315	0.88	-0.1
2,902,669	+				-1.6
2,902,669	+				+0.4
2,902,671	+				+1.6
2,902,671	+				+0.5
2,902,672	-				+2.3
2,902,765	-				-1.6
2,902,794	+				+0.4
2,902,819	+				+2.4
2,903,581	+		LU632_RS15320	0.69	-0.2
2,903,583	+		LU632_RS15320	0.69	+0.6
2,903,683	+		LU632_RS15320	0.79	+0.8
2,903,754	+		LU632_RS15320	0.86	+0.9
2,903,754	+		LU632_RS15320	0.86	+0.1
2,903,755	-		LU632_RS15320	0.86	+0.4
2,903,769	-		LU632_RS15320	0.87	-1.9
2,903,772	+		LU632_RS15320	0.88	+1.1
2,903,772	+		LU632_RS15320	0.88	+1.5
2,903,772	+		LU632_RS15320	0.88	+1.3
2,903,772	+		LU632_RS15320	0.88	-1.3
2,903,773	-		LU632_RS15320	0.88	+0.1
2,903,773	-		LU632_RS15320	0.88	+0.8
2,903,774	+		LU632_RS15320	0.88	-0.9
2,903,775	-		LU632_RS15320	0.88	+1.2
2,903,838	-				+0.1
2,904,056	-		LU632_RS15325	0.44	+2.5
2,904,056	-		LU632_RS15325	0.44	-0.0
2,904,106	-		LU632_RS15325	0.57	-0.8
2,904,276	+				+0.3
2,904,291	+				+1.6
2,904,448	+		LU632_RS15330	0.70	-3.4
2,904,550	-				-0.3