Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14325

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
2,736,783	-				+1.4
2,736,783	-				-0.6
2,736,785	-				+3.0
2,737,895	+		LU632_RS14325	0.27	-2.2
2,737,915	+		LU632_RS14325	0.30	-1.1
2,737,938	+		LU632_RS14325	0.33	-1.9
2,738,387	+				-1.7
2,738,387	+				-1.2
2,738,387	+				+1.0
2,738,948	+		LU632_RS14335	0.82	+0.2
2,738,948	+		LU632_RS14335	0.82	-0.3
2,738,948	+		LU632_RS14335	0.82	-0.7
2,738,949	-		LU632_RS14335	0.82	-0.1
2,738,949	-		LU632_RS14335	0.82	-2.6
2,738,950	+		LU632_RS14335	0.82	-0.2
2,738,950	+		LU632_RS14335	0.82	+0.8
2,738,950	+		LU632_RS14335	0.82	+0.4
2,738,950	+		LU632_RS14335	0.82	-0.3
2,738,951	-		LU632_RS14335	0.83	+0.4
2,738,951	-		LU632_RS14335	0.83	+0.3
2,738,951	-		LU632_RS14335	0.83	+1.4
2,739,144	+		LU632_RS14340	0.29	+2.4
2,739,144	+		LU632_RS14340	0.29	+0.7
2,739,189	-		LU632_RS14340	0.39	+2.4