Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14280

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
2,732,086	-		LU632_RS14265	0.73	-1.0
2,732,107	+		LU632_RS14265	0.78	+0.7
2,732,140	+		LU632_RS14265	0.85	+3.7
2,732,241	-				-0.6
2,732,244	+				-2.3
2,732,261	+				-1.3
2,732,261	+				+1.9
2,732,304	-		LU632_RS14270	0.19	+0.8
2,732,325	-		LU632_RS14270	0.25	+0.0
2,732,440	+		LU632_RS14270	0.55	+0.7
2,732,465	+		LU632_RS14270	0.61	+0.5
2,732,604	+				+0.1
2,732,611	+				+0.3
2,732,718	+		LU632_RS14275	0.43	-2.6
2,732,816	+				+0.1
2,732,816	+				-0.6
2,732,816	+				-0.0
2,732,816	+				+0.2
2,732,817	-				+1.6
2,732,817	-				-1.6
2,733,019	-				+0.7
2,733,142	+		LU632_RS14280	0.16	-2.8
2,733,154	+		LU632_RS14280	0.19	+1.4
2,733,273	+		LU632_RS14280	0.52	-1.6
2,733,274	-		LU632_RS14280	0.53	+0.6
2,733,314	-		LU632_RS14280	0.64	+1.6
2,733,533	-		LU632_RS14285	0.39	+1.7
2,733,533	-		LU632_RS14285	0.39	-1.3
2,733,533	-		LU632_RS14285	0.39	-0.2
2,733,570	-		LU632_RS14285	0.55	+1.4
2,733,712	-				-3.3
2,733,770	+		LU632_RS14290	0.18	+0.4
2,733,804	+		LU632_RS14290	0.31	+0.1
2,733,805	-		LU632_RS14290	0.31	-3.6