Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09045

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
1,701,480	+				-1.1
1,701,480	+				+2.2
1,701,481	-				-0.7
1,701,510	+				+0.5
1,701,624	-				-1.9
1,702,141	-		LU632_RS09040	0.41	+1.2
1,702,146	+		LU632_RS09040	0.42	+2.0
1,702,203	+		LU632_RS09040	0.60	-0.0
1,702,216	-		LU632_RS09040	0.64	-0.2
1,702,280	+		LU632_RS09040	0.84	+0.4
1,702,281	-		LU632_RS09040	0.85	+3.3
1,702,293	-		LU632_RS09040	0.88	-2.3
1,702,293	-		LU632_RS09040	0.88	+0.3
1,702,342	+				-1.8
1,702,346	+				+1.9
1,702,349	-				-0.7
1,702,349	-				+0.7
1,702,429	+		LU632_RS09045	0.40	+1.0
1,702,507	-		LU632_RS09045	0.80	+0.3
1,702,583	-				-1.1
1,702,637	+				-0.1
1,702,658	-				-1.8
1,702,818	-				-0.1