Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06555

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
1,260,583	-		LU632_RS06550	0.84	+2.2
1,260,594	+		LU632_RS06550	0.87	-1.7
1,260,594	+		LU632_RS06550	0.87	+1.4
1,260,595	-		LU632_RS06550	0.87	-1.5
1,260,595	-		LU632_RS06550	0.87	+0.7
1,260,595	-		LU632_RS06550	0.87	-0.4
1,260,606	+				+0.3
1,260,606	+				-3.2
1,260,678	-				+0.7
1,260,699	-				+0.9
1,260,718	+				+0.5
1,260,719	-				-1.7
1,260,719	-				-0.9
1,260,899	+				+0.2
1,260,900	-				+0.6
1,261,030	+				-2.0
1,261,033	-				+0.4
1,261,033	-				+2.3
1,261,065	+				+0.7
1,261,075	-				+0.9
1,261,079	-				+0.7
1,261,095	-				-0.4
1,261,229	+				+0.5
1,261,230	-				+4.5
1,261,286	+				-0.8
1,261,342	+				-0.3
1,261,343	-				-1.2
1,261,376	-				-3.7
1,261,377	+				+0.2
1,261,377	+				+1.6
1,261,377	+				+0.4
1,261,378	-				+0.5
1,261,425	+				+0.1
1,262,334	-		LU632_RS06555	0.76	-1.4
1,262,894	-				-2.8