Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05885

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
1,115,053	-	pepP	LU632_RS05880	0.28	+2.0
1,115,053	-	pepP	LU632_RS05880	0.28	+0.6
1,115,053	-	pepP	LU632_RS05880	0.28	+1.4
1,115,058	-	pepP	LU632_RS05880	0.29	+1.7
1,115,113	+	pepP	LU632_RS05880	0.33	-1.0
1,115,183	+	pepP	LU632_RS05880	0.38	-1.3
1,115,242	+	pepP	LU632_RS05880	0.43	-0.3
1,115,294	+	pepP	LU632_RS05880	0.46	+0.5
1,115,294	+	pepP	LU632_RS05880	0.46	+0.6
1,115,294	+	pepP	LU632_RS05880	0.46	-1.0
1,115,360	+	pepP	LU632_RS05880	0.51	-1.7
1,115,360	+	pepP	LU632_RS05880	0.51	-0.2
1,115,360	+	pepP	LU632_RS05880	0.51	-0.1
1,115,368	+	pepP	LU632_RS05880	0.52	-0.3
1,115,405	+	pepP	LU632_RS05880	0.55	-0.2
1,115,405	+	pepP	LU632_RS05880	0.55	+3.2
1,115,565	+	pepP	LU632_RS05880	0.67	-1.6
1,115,565	+	pepP	LU632_RS05880	0.67	-2.4
1,115,717	+	pepP	LU632_RS05880	0.79	-0.6
1,115,717	+	pepP	LU632_RS05880	0.79	+1.8
1,115,717	+	pepP	LU632_RS05880	0.79	-3.5
1,115,771	+	pepP	LU632_RS05880	0.83	-2.8
1,115,806	+	pepP	LU632_RS05880	0.85	+0.9
1,115,834	+	pepP	LU632_RS05880	0.87	+1.6
1,115,834	+	pepP	LU632_RS05880	0.87	-1.5
1,115,836	+	pepP	LU632_RS05880	0.88	-2.0