Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05315

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
1,026,434	-				-1.0
1,026,434	-				+0.5
1,026,434	-				+0.9
1,026,565	-				+3.4
1,026,723	+				+0.2
1,026,724	-				+1.9
1,026,724	-				-0.8
1,026,724	-				+1.7
1,026,806	+				+1.4
1,026,809	+				+1.7
1,026,809	+				+0.0
1,026,809	+				+3.6
1,026,857	-				+1.5
1,026,869	+				-2.9
1,026,872	+				-0.6
1,026,872	+				+1.3
1,026,872	+				+0.6
1,026,873	-				+1.0
1,026,927	+				+0.3
1,026,947	-				-1.4
1,026,999	+				-0.4
1,027,000	-				-0.2
1,027,055	+				-2.2
1,027,055	+				+0.1
1,027,087	-				+0.2
1,027,220	+				-2.7
1,027,230	+				-1.0
1,027,231	-				+1.8
1,027,404	+		LU632_RS05315	0.19	+2.1
1,027,405	-		LU632_RS05315	0.19	+1.9
1,027,414	+		LU632_RS05315	0.20	+1.2
1,027,427	-		LU632_RS05315	0.21	+0.1
1,027,429	-		LU632_RS05315	0.22	-0.4
1,027,429	-		LU632_RS05315	0.22	-0.9
1,027,580	+		LU632_RS05315	0.38	-0.7
1,027,687	+		LU632_RS05315	0.50	-1.7
1,027,689	+		LU632_RS05315	0.50	-2.2
1,027,704	+		LU632_RS05315	0.52	+0.6
1,027,705	-		LU632_RS05315	0.52	-1.1
1,027,797	+		LU632_RS05315	0.62	+0.4
1,027,818	+		LU632_RS05315	0.64	-1.6
1,027,827	+		LU632_RS05315	0.65	+2.0
1,027,943	-		LU632_RS05315	0.78	+0.3
1,027,997	-		LU632_RS05315	0.84	-0.7
1,028,024	-		LU632_RS05315	0.87	+1.1
1,028,167	-				+0.5
1,028,196	+				-0.4
1,028,201	-				+0.3
1,028,228	-				+0.6
1,028,229	+				+1.9
1,028,230	-				+0.2
1,028,409	+		LU632_RS05320	0.33	-0.6
1,029,052	-				-2.7
1,029,068	+				+0.6
1,029,068	+				-1.0