Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS02700

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
542,546	+				-0.5
542,552	-				+1.5
542,620	+				-0.2
543,471	+				-1.8
543,471	+				-0.4
543,473	+				-2.0
543,473	+				+0.9
543,473	+				-2.3
543,501	+				+0.9
543,501	+				+2.3
543,503	+				+0.6
544,047	-				-1.2
544,047	-				-1.1
544,049	-				-0.5
544,054	-				+1.0
544,129	-				+0.7
544,145	-				-1.2
544,148	+				+0.8
544,149	-				+1.8
544,149	-				-0.2
544,191	-				-0.7
544,276	-	djlA	LU632_RS02710	0.16	+0.0
544,400	-	djlA	LU632_RS02710	0.31	+1.4