Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS01830

Experiment: Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Main Stem (TE2-S-C5-MS)
350,994	+				+0.1
351,126	+				+0.1
351,128	+				-0.0
351,128	+				+0.1
351,128	+				+2.0
351,129	-				-0.7
351,129	-				-0.7
351,129	-				-0.8
351,129	-				+0.4
351,129	-				+0.5
351,168	-				-0.2
351,168	-				-1.2
351,168	-				-1.2
351,802	-		LU632_RS01825	0.76	-0.8
351,802	-		LU632_RS01825	0.76	+1.6
352,702	+				+0.7
352,747	+				+0.6
352,748	-				-0.2
352,775	+				+2.0
352,775	+				+1.4
352,775	+				+0.9
352,776	-				-0.4
352,778	-				+0.8
352,778	-				-2.3
352,788	+				-1.8
353,585	-				-3.0
353,593	+				+0.8
353,593	+				-4.0
353,601	+				+0.6
353,601	+				+0.7
353,602	-				+0.4
353,602	-				+0.1
353,602	-				+2.0
353,602	-				-0.6
353,602	-				+0.6
353,602	-				-0.7
353,605	+				+1.4
353,676	-				-1.7