Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23755

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
4,532,142	+		LU632_RS23750	0.26	-0.1
4,532,195	+		LU632_RS23750	0.31	-1.5
4,532,196	-		LU632_RS23750	0.31	+0.7
4,532,268	+		LU632_RS23750	0.39	-2.4
4,532,272	-		LU632_RS23750	0.39	+2.2
4,532,275	+		LU632_RS23750	0.40	+0.2
4,532,289	+		LU632_RS23750	0.41	+0.0
4,532,289	+		LU632_RS23750	0.41	+2.4
4,532,289	+		LU632_RS23750	0.41	-0.4
4,532,290	-		LU632_RS23750	0.41	-0.9
4,532,290	-		LU632_RS23750	0.41	+1.2
4,532,290	-		LU632_RS23750	0.41	-0.2
4,532,454	-		LU632_RS23750	0.58	+0.6
4,532,457	+		LU632_RS23750	0.58	-2.0
4,532,661	+		LU632_RS23750	0.79	+0.8
4,532,661	+		LU632_RS23750	0.79	+0.8
4,532,662	-		LU632_RS23750	0.79	+0.1
4,532,662	-		LU632_RS23750	0.79	+1.2
4,532,872	-				+1.3
4,532,919	+				+2.0
4,533,001	+				+2.8
4,533,008	-				+0.9
4,533,101	-				+0.1
4,533,171	+	pspG	LU632_RS23755	0.29	+1.2
4,533,172	-	pspG	LU632_RS23755	0.29	-1.9
4,533,334	+				+1.1
4,533,356	-				+0.2
4,533,363	-				-2.2
4,533,450	+				-1.3
4,533,451	-				+1.3
4,533,451	-				-1.6
4,533,453	+				+1.2
4,533,453	+				+0.4
4,533,458	+				-0.2
4,533,461	+				+1.5
4,533,464	+				-0.3
4,533,494	-				+0.9
4,533,494	-				+0.4
4,533,544	+				+0.3
4,533,553	-				-0.1
4,533,556	+				-2.2
4,533,556	+				+0.1
4,533,564	+				+1.2
4,533,565	-				+0.8
4,533,676	+				-2.2
4,533,676	+				+0.2
4,533,677	-				-0.8
4,533,682	-				+0.9
4,533,723	+				+0.4
4,533,750	+				+0.7
4,533,802	-				-0.9
4,533,923	+				-1.2