Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22970

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
4,377,363	+				+0.2
4,377,363	+				+2.2
4,377,364	-				+1.7
4,377,375	-				+0.1
4,377,495	+				-1.1
4,377,496	-				+0.2
4,377,582	+				-0.3
4,377,582	+				+2.2
4,377,583	-				-0.5
4,377,583	-				+0.7
4,377,583	-				-1.0
4,377,627	+				-0.3
4,377,628	-				+0.5
4,377,722	+				+1.1
4,377,722	+				-0.4
4,377,756	+				+0.0
4,377,760	+				+0.9
4,377,760	+				+1.2
4,377,802	+				+1.2
4,377,805	+				+0.9
4,377,806	-				+2.0
4,377,806	-				-2.4
4,377,997	-				+0.2
4,378,013	+				-0.1
4,378,013	+				+0.5
4,378,014	-				-0.8
4,378,055	+				-0.1
4,378,056	-				+0.5
4,378,195	+				-1.6
4,378,201	+				-0.2
4,378,201	+				-1.1
4,378,258	+		LU632_RS22970	0.24	-1.1
4,378,258	+		LU632_RS22970	0.24	+1.7
4,378,259	-		LU632_RS22970	0.24	+2.2
4,378,263	-		LU632_RS22970	0.26	+0.5
4,378,263	-		LU632_RS22970	0.26	+1.7
4,378,497	-				-1.1
4,378,590	+				+0.7
4,378,591	-				+2.6
4,378,626	-				+2.3
4,379,445	+				+2.9
4,379,450	+				-1.0
4,379,451	-				+0.2