Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22035

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
4,205,612	-		LU632_RS22030	0.14	-0.3
4,205,662	-		LU632_RS22030	0.18	+0.5
4,205,674	+		LU632_RS22030	0.20	-0.2
4,205,675	-		LU632_RS22030	0.20	-2.7
4,205,691	+		LU632_RS22030	0.21	-0.2
4,205,723	-		LU632_RS22030	0.24	+1.5
4,205,754	+		LU632_RS22030	0.27	+1.0
4,205,780	+		LU632_RS22030	0.29	-0.8
4,205,794	+		LU632_RS22030	0.30	+0.4
4,205,795	-		LU632_RS22030	0.31	+0.1
4,205,796	+		LU632_RS22030	0.31	+0.1
4,205,796	+		LU632_RS22030	0.31	-0.1
4,205,796	+		LU632_RS22030	0.31	-2.4
4,205,797	-		LU632_RS22030	0.31	-1.1
4,205,859	+		LU632_RS22030	0.36	-0.5
4,205,876	-		LU632_RS22030	0.38	-1.1
4,205,891	+		LU632_RS22030	0.39	-0.4
4,205,892	-		LU632_RS22030	0.39	-0.3
4,206,050	+		LU632_RS22030	0.54	-2.0
4,206,058	-		LU632_RS22030	0.55	+0.8
4,206,087	+		LU632_RS22030	0.57	-0.2
4,206,289	+		LU632_RS22030	0.76	-1.5
4,206,290	-		LU632_RS22030	0.76	-0.4
4,206,306	+		LU632_RS22030	0.77	+1.8
4,206,307	-		LU632_RS22030	0.77	+2.6
4,206,415	-		LU632_RS22030	0.87	-2.3
4,206,415	-		LU632_RS22030	0.87	+0.5
4,206,450	+				-0.0
4,206,511	+				-2.0
4,206,511	+				+2.5
4,206,511	+				+1.9
4,206,607	+				+1.0
4,206,607	+				-3.0
4,206,608	-				+1.8
4,206,608	-				+2.2
4,206,711	+		LU632_RS22035	0.15	+0.5
4,206,711	+		LU632_RS22035	0.15	+0.2
4,206,803	+		LU632_RS22035	0.25	-1.6
4,206,803	+		LU632_RS22035	0.25	+1.9
4,206,804	-		LU632_RS22035	0.25	+1.0
4,206,804	-		LU632_RS22035	0.25	+1.4
4,206,876	+		LU632_RS22035	0.33	-2.7
4,206,910	+		LU632_RS22035	0.36	-0.4
4,206,911	-		LU632_RS22035	0.37	-1.6
4,206,911	-		LU632_RS22035	0.37	+0.5
4,206,912	+		LU632_RS22035	0.37	-2.8
4,206,912	+		LU632_RS22035	0.37	+1.2
4,206,913	-		LU632_RS22035	0.37	-1.8
4,206,913	-		LU632_RS22035	0.37	-0.0
4,207,022	+		LU632_RS22035	0.49	-1.0
4,207,285	+		LU632_RS22035	0.78	+0.3
4,207,349	-		LU632_RS22035	0.85	-2.4
4,207,457	-				+0.8
4,207,466	+				+1.2
4,207,467	-				-0.1
4,207,571	+		LU632_RS22040	0.11	+0.9
4,207,572	-		LU632_RS22040	0.11	+3.5
4,207,604	-		LU632_RS22040	0.14	-2.3
4,207,642	+		LU632_RS22040	0.18	+0.1
4,207,643	-		LU632_RS22040	0.18	+3.4
4,207,643	-		LU632_RS22040	0.18	-2.1
4,207,659	+		LU632_RS22040	0.20	+0.5
4,207,660	-		LU632_RS22040	0.20	-0.6
4,207,660	-		LU632_RS22040	0.20	-0.8
4,207,685	-		LU632_RS22040	0.23	+0.1
4,207,723	-		LU632_RS22040	0.27	-0.1
4,208,074	+		LU632_RS22040	0.64	+0.2
4,208,138	+		LU632_RS22040	0.71	-0.4
4,208,141	+		LU632_RS22040	0.71	+0.6
4,208,142	-		LU632_RS22040	0.72	+0.2
4,208,204	-		LU632_RS22040	0.78	+1.2
4,208,240	+		LU632_RS22040	0.82	-0.6
4,208,263	-		LU632_RS22040	0.84	+2.2
4,208,301	+		LU632_RS22040	0.88	+0.9
4,208,311	-		LU632_RS22040	0.90	-0.8
4,208,354	-				-1.4