Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21085

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
4,029,756	-	rimP	LU632_RS21070	0.75	-0.4
4,029,785	-	rimP	LU632_RS21070	0.81	-2.4
4,029,901	-				-2.0
4,029,980	-				-1.9
4,030,033	-				-3.1
4,030,041	-				-2.9
4,030,055	-				-2.9
4,030,472	-	secG	LU632_RS21085	0.36	-2.4
4,030,490	-	secG	LU632_RS21085	0.41	-3.4
4,030,653	-	secG	LU632_RS21085	0.90	-4.6
4,030,688	-				-3.3
4,030,734	-				-1.7
4,030,816	-				-0.8
4,030,826	+				+0.3
4,030,826	+				+0.0
4,030,911	-				+0.4
4,030,946	+				+1.2
4,030,960	+				-2.0
4,030,983	+				+0.4
4,030,986	+				+0.5
4,030,987	-				-0.8
4,030,990	+				+0.9
4,030,990	+				-1.2
4,030,990	+				-2.2
4,030,991	-				-0.0
4,030,991	-				-1.4
4,031,000	+				+0.5