Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20930

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
3,997,850	+		LU632_RS20920	0.84	-0.0
3,997,869	-		LU632_RS20920	0.88	-0.9
3,997,898	+				+1.1
3,997,899	-				+1.3
3,997,923	+				-0.6
3,997,923	+				-2.0
3,997,930	+				+0.9
3,997,930	+				+0.6
3,997,931	-				-0.0
3,997,937	+				-1.0
3,997,937	+				+1.9
3,997,937	+				-0.3
3,997,937	+				+1.1
3,997,937	+				-1.2
3,997,938	-				+2.1
3,997,938	-				-2.0
3,997,938	-				+2.3
3,997,952	-				+1.1
3,997,952	-				-0.5
3,997,955	+				-0.0
3,997,956	-				-0.7
3,998,053	-				-0.3
3,998,084	-				-1.2
3,998,084	-				-2.5
3,998,158	+				+0.8
3,998,181	+				-0.0
3,998,182	-				-1.7
3,998,211	+		LU632_RS20925	0.13	+1.1
3,998,234	+		LU632_RS20925	0.17	+2.1
3,998,234	+		LU632_RS20925	0.17	+1.4
3,998,234	+		LU632_RS20925	0.17	+0.9
3,998,266	-		LU632_RS20925	0.24	-1.2
3,998,277	-		LU632_RS20925	0.26	+1.8
3,998,277	-		LU632_RS20925	0.26	-1.5
3,998,338	+		LU632_RS20925	0.38	-0.5
3,998,364	+		LU632_RS20925	0.43	-1.5
3,998,364	+		LU632_RS20925	0.43	-0.2
3,998,369	+		LU632_RS20925	0.44	-0.7
3,998,369	+		LU632_RS20925	0.44	+1.1
3,998,370	-		LU632_RS20925	0.44	-1.5
3,998,440	+		LU632_RS20925	0.58	-1.8
3,998,487	-		LU632_RS20925	0.68	-1.5
3,998,535	+		LU632_RS20925	0.77	-2.5
3,998,685	-				+1.4
3,998,685	-				-1.9
3,998,685	-				+0.3
3,998,739	-				-1.8
3,998,739	-				-1.8
3,999,300	+		LU632_RS20930	0.69	+4.0
3,999,322	-		LU632_RS20930	0.72	+1.0
3,999,594	+				+0.1
3,999,594	+				+1.9
3,999,595	-				+1.1
3,999,630	-				+1.1
3,999,639	+				-0.7