Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19275

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
3,644,904	-				+1.3
3,644,913	+				-4.4
3,644,914	-				-0.4
3,645,067	-	ftsX	LU632_RS19270	0.18	-2.5
3,645,096	+	ftsX	LU632_RS19270	0.21	-2.6
3,645,210	-	ftsX	LU632_RS19270	0.32	-3.1
3,645,259	-	ftsX	LU632_RS19270	0.37	-0.0
3,645,261	+	ftsX	LU632_RS19270	0.37	-2.2
3,645,261	+	ftsX	LU632_RS19270	0.37	+4.0
3,645,262	-	ftsX	LU632_RS19270	0.37	-2.9
3,645,262	-	ftsX	LU632_RS19270	0.37	+1.0
3,645,262	-	ftsX	LU632_RS19270	0.37	-1.8
3,645,262	-	ftsX	LU632_RS19270	0.37	-3.2
3,645,383	+	ftsX	LU632_RS19270	0.49	-1.9
3,645,384	-	ftsX	LU632_RS19270	0.50	-2.3
3,645,425	+	ftsX	LU632_RS19270	0.54	-0.0
3,645,426	-	ftsX	LU632_RS19270	0.54	-2.6
3,645,426	-	ftsX	LU632_RS19270	0.54	-2.6
3,645,426	-	ftsX	LU632_RS19270	0.54	-2.0
3,645,428	+	ftsX	LU632_RS19270	0.54	-2.0
3,645,461	+	ftsX	LU632_RS19270	0.57	-2.5
3,645,461	+	ftsX	LU632_RS19270	0.57	-2.2
3,645,526	+	ftsX	LU632_RS19270	0.64	-1.3
3,645,527	-	ftsX	LU632_RS19270	0.64	-1.0
3,645,674	+	ftsX	LU632_RS19270	0.79	-1.3
3,645,674	+	ftsX	LU632_RS19270	0.79	-2.0
3,645,696	-	ftsX	LU632_RS19270	0.81	-4.0
3,645,710	+	ftsX	LU632_RS19270	0.82	-0.0
3,645,710	+	ftsX	LU632_RS19270	0.82	-1.0
3,645,752	+	ftsX	LU632_RS19270	0.87	-1.6
3,645,752	+	ftsX	LU632_RS19270	0.87	-2.3
3,645,753	-	ftsX	LU632_RS19270	0.87	-1.9
3,645,779	-	ftsX	LU632_RS19270	0.89	+1.0
3,645,866	+				-2.9
3,645,867	-				+0.0
3,645,970	+	ftsE	LU632_RS19275	0.14	-4.3
3,646,102	-	ftsE	LU632_RS19275	0.34	-2.2
3,646,269	+	ftsE	LU632_RS19275	0.59	-2.1
3,646,402	-	ftsE	LU632_RS19275	0.79	-4.1
3,646,518	+				-1.8
3,646,519	+				-2.9