Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18240

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
3,446,433	+				+2.1
3,446,442	+				-2.7
3,446,498	-				+0.5
3,446,507	+				+0.4
3,446,507	+				+0.6
3,446,507	+				+0.4
3,446,508	-				+1.2
3,446,569	-				-0.1
3,446,632	+				+1.6
3,446,720	+				-2.3
3,446,769	-				+0.5
3,447,385	+				-0.6
3,447,999	-				-2.0
3,448,004	+				+1.9
3,448,206	+				-1.0
3,448,207	-				-2.7
3,448,281	+				+0.5
3,448,327	+				+0.9
3,448,328	-				+1.1
3,448,350	+				-0.4
3,448,350	+				-1.7
3,448,354	+				+1.5
3,448,354	+				-1.2
3,448,355	-				-0.3
3,448,370	-				-0.7
3,448,408	-		LU632_RS18255	0.15	+1.2
3,448,408	-		LU632_RS18255	0.15	-3.3
3,448,408	-		LU632_RS18255	0.15	-1.7
3,448,479	+		LU632_RS18255	0.36	+1.1
3,448,513	+		LU632_RS18255	0.45	-0.2
3,448,664	-				-1.2