Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17205

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
3,236,446	+				-0.0
3,236,542	-		LU632_RS17200	0.21	-1.7
3,236,552	-		LU632_RS17200	0.22	-1.4
3,236,563	+		LU632_RS17200	0.23	+0.4
3,236,564	-		LU632_RS17200	0.23	+1.1
3,236,564	-		LU632_RS17200	0.23	-0.1
3,236,565	+		LU632_RS17200	0.23	-0.7
3,236,566	-		LU632_RS17200	0.23	+1.9
3,236,734	+		LU632_RS17200	0.42	+1.3
3,236,737	+		LU632_RS17200	0.43	-2.1
3,236,738	-		LU632_RS17200	0.43	+0.5
3,236,892	+		LU632_RS17200	0.61	-0.1
3,236,897	+		LU632_RS17200	0.61	+4.0
3,236,897	+		LU632_RS17200	0.61	+0.6
3,236,897	+		LU632_RS17200	0.61	-0.6
3,236,898	-		LU632_RS17200	0.61	-2.4
3,236,959	+		LU632_RS17200	0.68	+0.5
3,237,011	-		LU632_RS17200	0.74	+1.3
3,237,147	+		LU632_RS17200	0.90	+1.2
3,237,147	+		LU632_RS17200	0.90	-0.3
3,237,147	+		LU632_RS17200	0.90	+0.6
3,237,161	-				-0.3
3,237,174	+				-2.4
3,237,174	+				-0.7
3,237,174	+				+0.6
3,237,174	+				-1.3
3,237,175	-				+0.6
3,237,175	-				+2.3
3,237,175	-				-2.7
3,237,175	-				-2.8
3,237,283	-				+1.6
3,237,306	+				-0.2
3,237,308	+				-0.1
3,237,399	+		LU632_RS17205	0.36	-0.1
3,237,400	-		LU632_RS17205	0.36	-2.4
3,237,403	-		LU632_RS17205	0.38	-2.3
3,238,187	+		LU632_RS17215	0.41	-0.1
3,238,333	+				+2.2
3,238,333	+				+0.7
3,238,338	+				+0.6
3,238,381	-				+1.5
3,238,381	-				-0.4
3,238,461	+		LU632_RS17220	0.16	+1.6
3,238,485	+		LU632_RS17220	0.29	-2.4