Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17070

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
3,213,911	+		LU632_RS17065	0.22	+0.8
3,214,275	-		LU632_RS17065	0.52	+0.1
3,214,282	-		LU632_RS17065	0.53	+0.6
3,214,391	+		LU632_RS17065	0.62	-2.6
3,214,642	-		LU632_RS17065	0.82	-1.2
3,214,709	+		LU632_RS17065	0.88	-0.2
3,214,711	+		LU632_RS17065	0.88	-2.9
3,214,761	-				-1.7
3,214,900	+				+1.4
3,214,903	+				+0.5
3,214,957	+		LU632_RS17070	0.12	+0.2
3,214,994	+		LU632_RS17070	0.20	+2.7
3,215,050	+		LU632_RS17070	0.33	-0.7
3,215,111	+		LU632_RS17070	0.47	+2.2
3,215,161	-		LU632_RS17070	0.59	-2.0
3,215,234	-		LU632_RS17070	0.76	+1.0
3,215,408	-				-2.0
3,215,507	-		LU632_RS17075	0.16	-1.5
3,215,507	-		LU632_RS17075	0.16	+0.5
3,215,507	-		LU632_RS17075	0.16	-1.7
3,215,522	-		LU632_RS17075	0.18	+1.1
3,215,628	+		LU632_RS17075	0.28	-0.7
3,215,689	+		LU632_RS17075	0.34	-1.5
3,215,690	-		LU632_RS17075	0.34	-0.2
3,215,722	+		LU632_RS17075	0.37	+2.0
3,215,753	-		LU632_RS17075	0.40	+1.3
3,215,767	+		LU632_RS17075	0.41	-1.1
3,215,767	+		LU632_RS17075	0.41	-1.1
3,215,768	-		LU632_RS17075	0.41	-1.7
3,215,771	+		LU632_RS17075	0.41	+0.9
3,215,772	-		LU632_RS17075	0.41	+0.8
3,215,773	+		LU632_RS17075	0.42	+2.6
3,215,773	+		LU632_RS17075	0.42	+4.7
3,215,774	-		LU632_RS17075	0.42	-0.5
3,215,774	-		LU632_RS17075	0.42	+1.2
3,215,818	-		LU632_RS17075	0.46	-0.7
3,215,842	+		LU632_RS17075	0.48	-0.9
3,215,842	+		LU632_RS17075	0.48	-0.3
3,215,845	+		LU632_RS17075	0.48	-0.2
3,215,849	-		LU632_RS17075	0.49	-2.3
3,215,935	+		LU632_RS17075	0.57	-2.7
3,215,954	-		LU632_RS17075	0.59	-0.7
3,215,963	+		LU632_RS17075	0.60	+0.2
3,215,964	-		LU632_RS17075	0.60	+0.2
3,215,964	-		LU632_RS17075	0.60	+2.0
3,216,017	-		LU632_RS17075	0.65	-0.1
3,216,143	+		LU632_RS17075	0.77	-0.4
3,216,143	+		LU632_RS17075	0.77	-2.9
3,216,144	-		LU632_RS17075	0.77	+1.4
3,216,144	-		LU632_RS17075	0.77	+0.8
3,216,144	-		LU632_RS17075	0.77	+0.4
3,216,163	+		LU632_RS17075	0.79	+0.8
3,216,164	-		LU632_RS17075	0.79	-1.2
3,216,186	-		LU632_RS17075	0.81	+4.1
3,216,218	-		LU632_RS17075	0.84	-1.5
3,216,275	-		LU632_RS17075	0.90	-2.0