Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17035

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
3,209,477	-				+0.9
3,209,901	+				-0.3
3,209,902	-				-2.6
3,209,902	-				-0.1
3,209,993	+				+0.9
3,210,060	-				-1.5
3,210,270	-		LU632_RS17035	0.42	+1.3
3,210,415	+				-0.4
3,210,415	+				-2.3
3,210,415	+				-1.5
3,210,420	+				-0.1
3,210,420	+				-0.7
3,210,420	+				+1.6
3,210,421	-				-0.8
3,210,429	+				-0.7
3,210,429	+				+1.5
3,210,429	+				-2.3
3,210,430	-				+1.5
3,210,430	-				-0.1
3,210,500	+				+0.2
3,210,500	+				+0.2
3,210,500	+				-0.7
3,210,500	+				+0.2
3,210,501	-				-0.1
3,210,542	+		LU632_RS17040	0.16	-0.4
3,210,542	+		LU632_RS17040	0.16	+2.5
3,210,617	+		LU632_RS17040	0.57	+1.7
3,210,618	-		LU632_RS17040	0.58	-3.3
3,210,618	-		LU632_RS17040	0.58	+0.4
3,210,647	+		LU632_RS17040	0.74	-1.0
3,210,647	+		LU632_RS17040	0.74	-2.8
3,210,648	-		LU632_RS17040	0.74	-1.5