Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15475

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
2,934,847	+		LU632_RS15470	0.40	+0.4
2,934,848	-		LU632_RS15470	0.40	-1.1
2,934,939	+		LU632_RS15470	0.46	+1.7
2,935,228	+		LU632_RS15470	0.63	-1.2
2,935,228	+		LU632_RS15470	0.63	-0.4
2,935,228	+		LU632_RS15470	0.63	-0.3
2,935,229	-		LU632_RS15470	0.63	+1.1
2,935,229	-		LU632_RS15470	0.63	+0.3
2,935,232	+		LU632_RS15470	0.63	+0.0
2,935,233	-		LU632_RS15470	0.63	-0.8
2,935,274	-		LU632_RS15470	0.66	-0.5
2,935,274	-		LU632_RS15470	0.66	-0.5
2,935,395	+		LU632_RS15470	0.73	+0.2
2,935,452	+		LU632_RS15470	0.76	-2.7
2,935,485	+		LU632_RS15470	0.78	+1.6
2,935,686	-				+1.5
2,935,834	+				+0.5
2,935,849	+				+0.4
2,935,849	+				-2.4
2,935,849	+				-1.6
2,935,849	+				+3.2
2,935,850	-				-2.9
2,935,913	-		LU632_RS15475	0.12	-2.1
2,936,015	+		LU632_RS15475	0.31	+1.4
2,936,016	-		LU632_RS15475	0.31	+1.8
2,936,106	+		LU632_RS15475	0.48	-0.2
2,936,376	+				-1.8
2,936,805	+		LU632_RS15480	0.60	+0.3
2,936,806	-		LU632_RS15480	0.60	-3.1
2,936,893	-		LU632_RS15480	0.72	+1.5
2,936,971	+		LU632_RS15480	0.83	+1.1
2,937,230	-				-2.4
2,937,238	+		LU632_RS15485	0.10	-2.1
2,937,242	-		LU632_RS15485	0.11	-1.6
2,937,280	+		LU632_RS15485	0.13	+0.0