Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14835

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
2,819,461	-				-2.3
2,819,846	-	plsX	LU632_RS14835	0.39	-0.9
2,819,846	-	plsX	LU632_RS14835	0.39	-3.6
2,819,846	-	plsX	LU632_RS14835	0.39	+2.5
2,819,925	-	plsX	LU632_RS14835	0.47	-2.3
2,819,952	-	plsX	LU632_RS14835	0.49	-1.7
2,820,124	-	plsX	LU632_RS14835	0.66	-3.6
2,820,124	-	plsX	LU632_RS14835	0.66	-2.3
2,820,124	-	plsX	LU632_RS14835	0.66	-3.9
2,820,168	-	plsX	LU632_RS14835	0.70	-1.6
2,820,330	-	plsX	LU632_RS14835	0.86	-2.3
2,820,506	-				+0.7
2,820,891	-	yceD	LU632_RS14845	0.39	+0.9
2,821,131	-	yceD	LU632_RS14845	0.85	+0.7
2,821,330	+				+1.3