Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14375

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
2,741,986	-		LU632_RS14370	0.44	-0.3
2,741,996	+		LU632_RS14370	0.44	+0.8
2,741,997	-		LU632_RS14370	0.44	-3.3
2,742,334	+		LU632_RS14370	0.65	+1.7
2,742,334	+		LU632_RS14370	0.65	+1.9
2,742,378	+		LU632_RS14370	0.67	-0.9
2,742,379	-		LU632_RS14370	0.68	+0.5
2,742,450	+		LU632_RS14370	0.72	+1.5
2,742,450	+		LU632_RS14370	0.72	-1.6
2,742,512	+		LU632_RS14370	0.76	-1.1
2,742,513	-		LU632_RS14370	0.76	+0.2
2,742,513	-		LU632_RS14370	0.76	-0.9
2,742,513	-		LU632_RS14370	0.76	-0.9
2,742,590	-		LU632_RS14370	0.80	+2.5
2,742,590	-		LU632_RS14370	0.80	-0.4
2,742,798	-				+1.4
2,742,813	-				-0.4
2,742,813	-				+0.0
2,742,833	+				-0.6
2,742,834	-				-2.3
2,742,972	-				-0.2
2,743,196	+		LU632_RS14375	0.87	-1.7
2,743,291	+		LU632_RS14380	0.15	+0.9
2,743,518	+		LU632_RS14380	0.53	-0.9
2,743,522	-		LU632_RS14380	0.54	+0.5
2,743,588	+		LU632_RS14380	0.65	+0.4
2,743,632	+		LU632_RS14380	0.72	-1.6
2,743,633	-		LU632_RS14380	0.72	+0.8
2,743,644	-		LU632_RS14380	0.74	+0.9
2,743,735	+		LU632_RS14380	0.89	-1.6
2,743,736	-		LU632_RS14380	0.90	+2.8
2,743,808	-				-1.6