Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14215

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
2,724,692	+		LU632_RS14205	0.78	-0.2
2,724,692	+		LU632_RS14205	0.78	-0.3
2,724,696	+		LU632_RS14205	0.79	+2.3
2,724,709	+		LU632_RS14205	0.82	+0.1
2,724,723	+		LU632_RS14205	0.86	+2.3
2,724,723	+		LU632_RS14205	0.86	+0.2
2,724,723	+		LU632_RS14205	0.86	-0.9
2,724,728	-		LU632_RS14205	0.88	+1.9
2,724,796	-				+0.0
2,724,899	+		LU632_RS14210	0.17	+0.5
2,724,899	+		LU632_RS14210	0.17	-1.5
2,724,931	-		LU632_RS14210	0.23	-1.9
2,724,931	-		LU632_RS14210	0.23	+1.0
2,724,931	-		LU632_RS14210	0.23	-2.0
2,724,946	-		LU632_RS14210	0.25	-1.8
2,725,106	+		LU632_RS14210	0.51	-1.8
2,725,107	-		LU632_RS14210	0.51	-0.7
2,725,130	+		LU632_RS14210	0.55	-0.3
2,725,318	+		LU632_RS14210	0.86	+3.0
2,725,419	+				-1.0
2,725,419	+				-1.1
2,725,420	-				+0.1
2,725,423	-				+0.9
2,725,703	-		LU632_RS14215	0.67	+1.5
2,726,203	+		LU632_RS14220	0.47	-1.3
2,726,203	+		LU632_RS14220	0.47	-1.1
2,726,203	+		LU632_RS14220	0.47	+1.2
2,726,347	+		LU632_RS14220	0.69	-1.3
2,726,348	-		LU632_RS14220	0.69	-1.3
2,726,348	-		LU632_RS14220	0.69	-1.5
2,726,440	+		LU632_RS14220	0.83	-1.6
2,726,444	+		LU632_RS14220	0.84	+2.5
2,726,445	-		LU632_RS14220	0.84	-3.0
2,726,475	-		LU632_RS14220	0.89	+1.1
2,726,482	+		LU632_RS14220	0.90	+0.7
2,726,576	+				-2.0
2,726,576	+				+0.9
2,726,576	+				-0.0