Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS13255

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
2,532,073	-	proQ	LU632_RS13255	0.10	+2.6
2,532,073	-	proQ	LU632_RS13255	0.10	+3.3
2,532,496	-	proQ	LU632_RS13255	0.72	-2.8
2,532,496	-	proQ	LU632_RS13255	0.72	+1.1
2,532,529	-	proQ	LU632_RS13255	0.77	-2.5
2,532,702	-				+1.9
2,532,745	-				-0.3
2,532,782	+				+3.5
2,532,782	+				+3.6
2,532,785	+				+0.2
2,532,785	+				-1.3
2,532,785	+				-2.3
2,532,785	+				+1.9
2,532,786	-				-0.3
2,533,026	+		LU632_RS13260	0.48	-0.2
2,533,029	+		LU632_RS13260	0.49	+2.7
2,533,029	+		LU632_RS13260	0.49	+1.7
2,533,030	-		LU632_RS13260	0.49	+1.3
2,533,077	+		LU632_RS13260	0.58	+0.5
2,533,077	+		LU632_RS13260	0.58	-0.2
2,533,077	+		LU632_RS13260	0.58	+2.6
2,533,077	+		LU632_RS13260	0.58	-0.5
2,533,078	-		LU632_RS13260	0.59	+0.6
2,533,078	-		LU632_RS13260	0.59	+0.8
2,533,078	-		LU632_RS13260	0.59	-2.3
2,533,081	+		LU632_RS13260	0.59	+0.7
2,533,082	-		LU632_RS13260	0.59	+0.7
2,533,117	+		LU632_RS13260	0.66	+0.6
2,533,117	+		LU632_RS13260	0.66	+1.3
2,533,197	+		LU632_RS13260	0.82	+0.4
2,533,198	-		LU632_RS13260	0.83	+3.1
2,533,202	-		LU632_RS13260	0.83	+1.7
2,533,202	-		LU632_RS13260	0.83	+0.8
2,533,233	+		LU632_RS13260	0.90	+0.5
2,533,305	-				+0.0
2,533,380	+				+1.2
2,533,389	+				+0.1
2,533,390	-				-1.6
2,533,390	-				-1.6
2,533,390	-				+1.2
2,533,511	+				-0.3
2,533,515	-				-1.1