Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12085

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
2,294,506	+				+0.2
2,294,613	+				-3.2
2,294,775	+		LU632_RS12080	0.42	+0.8
2,294,779	-		LU632_RS12080	0.43	-0.2
2,294,959	+		LU632_RS12080	0.83	-1.7
2,294,959	+		LU632_RS12080	0.83	+0.6
2,294,960	-		LU632_RS12080	0.83	-1.2
2,294,960	-		LU632_RS12080	0.83	+0.6
2,295,021	-				+0.5
2,295,133	+				-0.6
2,295,136	-				-0.3
2,295,194	+				+0.6
2,295,412	+		LU632_RS12085	0.12	+0.4
2,295,442	-		LU632_RS12085	0.19	+4.3
2,295,487	-		LU632_RS12085	0.30	-1.0
2,295,524	+		LU632_RS12085	0.38	+0.9
2,295,679	+		LU632_RS12085	0.75	+2.8
2,295,688	+		LU632_RS12085	0.77	+0.8
2,295,754	-				+0.9
2,295,771	+				+0.3
2,295,855	-		LU632_RS12090	0.23	+1.0
2,295,856	+		LU632_RS12090	0.23	-1.4
2,295,867	+		LU632_RS12090	0.27	+1.2
2,295,868	-		LU632_RS12090	0.28	+1.3
2,296,024	-		LU632_RS12090	0.89	+0.4
2,296,024	-		LU632_RS12090	0.89	-2.5
2,296,024	-		LU632_RS12090	0.89	+0.1
2,296,024	-		LU632_RS12090	0.89	+0.6
2,296,028	-				-2.0
2,296,028	-				+3.0
2,296,028	-				-0.3
2,296,425	+		LU632_RS12095	0.87	+0.0
2,296,425	+		LU632_RS12095	0.87	+0.9
2,296,425	+		LU632_RS12095	0.87	+0.4
2,296,426	-		LU632_RS12095	0.87	-0.0
2,296,426	-		LU632_RS12095	0.87	+0.2
2,296,426	-		LU632_RS12095	0.87	-0.2
2,296,426	-		LU632_RS12095	0.87	-2.0
2,296,426	-		LU632_RS12095	0.87	-2.0
2,296,428	-		LU632_RS12095	0.88	+0.4
2,296,428	-		LU632_RS12095	0.88	-3.0
2,296,430	+		LU632_RS12095	0.88	+4.9
2,296,510	+				-2.4
2,296,512	+				-2.2
2,296,580	+				+0.5