Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10450

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
1,995,647	-	flgL	LU632_RS10445	0.61	-1.9
1,995,794	-	flgL	LU632_RS10445	0.76	-1.1
1,995,841	+	flgL	LU632_RS10445	0.81	-1.3
1,995,842	-	flgL	LU632_RS10445	0.81	-0.3
1,995,972	-				-0.8
1,995,972	-				-1.6
1,996,162	+				-0.0
1,996,205	-				-1.7
1,996,266	-				-1.1
1,996,309	+				-2.5
1,996,574	+				+0.3
1,996,748	+		LU632_RS10450	0.11	+2.9
1,996,944	+		LU632_RS10450	0.33	+5.9
1,997,022	+		LU632_RS10450	0.42	-0.5
1,997,218	+		LU632_RS10450	0.63	+4.9
1,997,218	+		LU632_RS10450	0.63	+4.2
1,997,571	-				-1.3
1,998,063	+				+0.2
1,998,375	+				-0.2