Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08370

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
1,573,329	-				-0.0
1,573,356	+		LU632_RS08360	0.14	-1.2
1,573,356	+		LU632_RS08360	0.14	-2.2
1,573,415	-		LU632_RS08360	0.30	-0.7
1,573,438	-		LU632_RS08360	0.36	+0.7
1,573,441	-		LU632_RS08360	0.36	+2.0
1,573,453	+		LU632_RS08360	0.40	+0.9
1,573,804	-		LU632_RS08365	0.32	-0.1
1,573,889	-		LU632_RS08365	0.54	+0.2
1,573,933	+		LU632_RS08365	0.66	-1.6
1,573,934	-		LU632_RS08365	0.66	-2.6
1,574,034	+				-0.5
1,574,035	-				+1.7
1,574,035	-				-2.1
1,574,057	+				-0.3
1,574,057	+				+0.2
1,574,062	-				+0.9
1,574,062	-				-2.1
1,574,062	-				-0.0
1,574,062	-				+0.3
1,574,959	+				+0.5
1,574,959	+				+0.6
1,574,959	+				-0.8
1,574,960	-				-1.1
1,574,984	+				+0.9
1,574,984	+				-0.8
1,574,985	-				+1.7
1,574,985	-				-0.3
1,574,986	+				+1.1
1,575,042	+				+0.3
1,575,042	+				-1.1
1,575,043	-				+0.0
1,575,043	-				+0.9
1,575,044	+				+0.6
1,575,044	+				+1.3
1,575,044	+				-1.1
1,575,095	-				-0.3
1,575,106	+				+1.3
1,575,107	-				-1.9
1,575,144	-				+1.3
1,575,146	+				+0.7
1,575,168	-				+1.9