Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08065

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
1,511,747	+				-1.1
1,511,750	+				+4.0
1,511,756	+				+0.2
1,511,809	+				+0.5
1,511,855	+				-3.3
1,511,907	+				-0.0
1,511,907	+				-1.1
1,511,907	+				-0.4
1,511,908	-				-3.3
1,511,930	+				+0.3
1,512,265	-		LU632_RS08060	0.36	-0.1
1,512,449	-		LU632_RS08060	0.69	-2.8
1,512,541	-		LU632_RS08060	0.86	-0.1
1,512,541	-		LU632_RS08060	0.86	-1.1
1,512,591	+				+0.5
1,512,591	+				+1.3
1,512,591	+				-2.4
1,512,591	+				+1.2
1,512,671	-		LU632_RS08065	0.42	+0.2
1,512,845	-		LU632_RS08070	0.19	+1.8
1,512,849	-		LU632_RS08070	0.20	-2.9
1,512,857	+		LU632_RS08070	0.21	-0.4
1,512,857	+		LU632_RS08070	0.21	-2.1
1,512,893	+		LU632_RS08070	0.27	-0.8
1,512,894	-		LU632_RS08070	0.27	-0.6
1,512,894	-		LU632_RS08070	0.27	-0.4
1,512,914	+		LU632_RS08070	0.30	-0.2
1,512,914	+		LU632_RS08070	0.30	+0.9
1,512,914	+		LU632_RS08070	0.30	-1.7
1,512,915	-		LU632_RS08070	0.30	-2.7
1,512,915	-		LU632_RS08070	0.30	+0.4
1,512,998	+		LU632_RS08070	0.43	-3.9
1,512,998	+		LU632_RS08070	0.43	+2.5
1,512,999	-		LU632_RS08070	0.43	-1.9
1,513,025	-		LU632_RS08070	0.47	-0.1
1,513,091	+		LU632_RS08070	0.57	-1.8
1,513,116	-		LU632_RS08070	0.61	+1.6
1,513,164	-		LU632_RS08070	0.68	+1.5
1,513,186	+		LU632_RS08070	0.71	-0.2
1,513,187	-		LU632_RS08070	0.72	+0.2
1,513,247	-		LU632_RS08070	0.81	-0.1
1,513,247	-		LU632_RS08070	0.81	+1.7
1,513,250	+		LU632_RS08070	0.81	-0.9
1,513,273	+		LU632_RS08070	0.85	-0.7
1,513,273	+		LU632_RS08070	0.85	-3.1
1,513,322	+				+1.5
1,513,371	+				+0.1
1,513,372	-				-0.1
1,513,398	+				-1.0
1,513,398	+				-1.6
1,513,399	-				+1.6
1,513,399	-				-0.7
1,513,399	-				+1.5
1,513,417	-				+1.1
1,513,421	+				+2.0
1,513,422	-				+2.3
1,513,449	+				+0.6
1,513,449	+				+0.3
1,513,450	-				-0.0
1,513,450	-				-0.7
1,513,450	-				+0.9
1,513,453	-				+0.9
1,513,458	+				+0.5
1,513,524	+				+0.2
1,513,525	-				-0.8
1,513,681	-		LU632_RS08075	0.16	+0.8
1,513,695	+		LU632_RS08075	0.17	-0.2
1,513,696	-		LU632_RS08075	0.17	-0.4
1,513,696	-		LU632_RS08075	0.17	+0.7
1,513,696	-		LU632_RS08075	0.17	+0.9
1,513,702	-		LU632_RS08075	0.18	-1.1