Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07685

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
1,437,029	+		LU632_RS07670	0.41	+0.5
1,437,030	-		LU632_RS07670	0.42	-0.7
1,437,144	-		LU632_RS07670	0.84	-1.9
1,437,293	+				-0.8
1,437,294	-				+0.9
1,437,294	-				-0.1
1,437,724	-				+1.2
1,437,955	-				-1.7
1,437,972	-				+0.4
1,437,979	-				+0.4
1,438,265	-		LU632_RS07685	0.86	+1.7
1,438,348	-				-0.2
1,438,464	-		LU632_RS07690	0.16	-1.1
1,438,464	-		LU632_RS07690	0.16	-0.3
1,438,510	-		LU632_RS07690	0.21	-2.3
1,438,973	-		LU632_RS07690	0.73	-3.5
1,438,975	-		LU632_RS07690	0.73	-1.2
1,438,978	+		LU632_RS07690	0.73	-0.8
1,438,978	+		LU632_RS07690	0.73	-3.1
1,439,010	+		LU632_RS07690	0.77	-1.7
1,439,153	-				-0.1
1,439,200	-				-1.8
1,439,200	-				+0.0
1,439,251	-				+1.2
1,439,304	-				+0.9
1,439,304	-				+0.7
1,439,304	-				-1.4