Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05515

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
1,065,014	-	speA	LU632_RS05510	0.69	-1.7
1,065,248	+	speA	LU632_RS05510	0.81	-1.7
1,065,419	-				+0.9
1,065,600	-				-0.1
1,065,687	+				+0.4
1,065,791	+				-0.7
1,066,094	+	speB	LU632_RS05515	0.33	-2.8
1,066,095	-	speB	LU632_RS05515	0.33	-2.7
1,066,248	+	speB	LU632_RS05515	0.50	-1.1
1,066,462	-	speB	LU632_RS05515	0.73	-1.9
1,066,515	-	speB	LU632_RS05515	0.78	+2.5
1,066,768	+				+1.5
1,067,070	+				+0.5
1,067,071	-				+1.2
1,067,071	-				-2.4
1,067,071	-				-2.1
1,067,072	+				-0.9
1,067,072	+				-0.9
1,067,072	+				-0.1
1,067,072	+				+1.1
1,067,072	+				-0.7
1,067,072	+				-0.4
1,067,072	+				-0.5
1,067,072	+				+0.2
1,067,072	+				-0.3
1,067,073	-				+0.7
1,067,073	-				+0.4
1,067,073	-				-2.1
1,067,074	+				-0.1
1,067,074	+				-0.8
1,067,075	-				+0.3
1,067,184	+				+0.5
1,067,201	+				-0.5
1,067,202	-				-1.1
1,067,268	+				-0.9
1,067,269	-				+0.9
1,067,271	-				+1.9
1,067,290	-				+0.3
1,067,290	-				+0.3
1,067,293	+				-1.9
1,067,293	+				+0.8
1,067,348	+				-2.4
1,067,349	-				-0.7
1,067,349	-				+0.6
1,067,496	+				+1.3
1,067,507	+				+0.5
1,067,507	+				+2.8
1,067,508	-				-1.7
1,067,541	+				+0.5
1,067,541	+				-0.1
1,067,541	+				-0.4
1,067,542	-				+0.9
1,067,542	-				+2.1
1,067,545	+				+0.2
1,067,546	-				+0.7
1,067,584	+				+0.3
1,067,584	+				+0.6
1,067,584	+				-1.1
1,067,585	-				+0.9
1,067,645	+				-0.3
1,067,646	-				-0.9
1,067,703	+				+0.1
1,067,704	-				+0.5