Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04740

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
931,570	-		LU632_RS04735	0.69	-1.0
931,579	-		LU632_RS04735	0.70	-2.5
931,622	+		LU632_RS04735	0.72	+0.7
931,704	-		LU632_RS04735	0.76	+1.3
931,704	-		LU632_RS04735	0.76	-1.2
931,704	-		LU632_RS04735	0.76	-1.0
931,707	+		LU632_RS04735	0.76	+2.6
931,708	-		LU632_RS04735	0.76	-2.0
931,716	-		LU632_RS04735	0.76	+1.3
931,743	+		LU632_RS04735	0.78	+0.2
931,775	+		LU632_RS04735	0.79	+0.7
931,775	+		LU632_RS04735	0.79	+1.5
931,821	+		LU632_RS04735	0.82	+2.0
931,821	+		LU632_RS04735	0.82	+1.0
931,821	+		LU632_RS04735	0.82	+1.0
931,821	+		LU632_RS04735	0.82	+1.4
931,821	+		LU632_RS04735	0.82	+0.5
931,821	+		LU632_RS04735	0.82	+1.3
931,822	-		LU632_RS04735	0.82	-0.6
931,822	-		LU632_RS04735	0.82	+1.3
931,848	-		LU632_RS04735	0.83	+2.4
931,906	+		LU632_RS04735	0.86	-1.8
931,906	+		LU632_RS04735	0.86	+1.3
931,906	+		LU632_RS04735	0.86	-1.0
931,907	-		LU632_RS04735	0.86	+0.8
931,995	-				-1.5
932,312	+		LU632_RS04740	0.15	-0.5
932,313	-		LU632_RS04740	0.15	+4.2
932,555	-				-1.2
932,578	-				+0.5
932,578	-				-0.2